RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA681822", tax_clade = "Sar" and tax_phylum = "Perkinsozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA681822 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10859691 10859691 PRJNA681822_P_NODE_434689_length_246_cov_0.890173_g433200_i0 PRJNA681822 434689 246 0.890173 2.18982558 Perkinsus marinus 31276 SAR_Eukaryotes SAR_Eukaryotes 189 1.62e-43   NTclustered gi|294897197|ref|XM_002775826.1| 423536 g433200 i0 81.481 58.8414634146341 243 33 96 10 1 237 160 396 Perkinsus marinus ATCC 50983 60S ribosomal protein L27a, putative, mRNA blastn 14475 189 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
13924307 13924307 PRJNA681822_P_NODE_267331_length_282_cov_1.473684_g265842_i0 PRJNA681822 267331 282 1.473684 4.15578888 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 161 1.59e-48   NR KAF4687713.1 32597 g265842 i0 71.4 166.127659574468 98 21 96.8 1 280 8 30 127 KAF4687713.1 serine threonine-protein phosphatase [Perkinsus olseni] diamond 46848 162 0.993827160493827 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
28787134 28787134 PRJNA681822_P_NODE_356667_length_258_cov_2.362162_g355178_i0 PRJNA681822 356667 258 2.362162 6.09437796 Perkinsus chesapeaki 330153 SAR_Eukaryotes SAR_Eukaryotes 45.8 0.0036   NR KAF4648926.1 330153 g355178 i0 39.3 0.651162790697674 56 31 61.6 2 2 160 557 612 KAF4648926.1 hypothetical protein FOL47_002644, partial [Perkinsus chesapeaki] diamond 168 45.8 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus chesapeaki

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;