RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA681822", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA681822 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28092664 28092664 PRJNA681822_P_NODE_308185_length_272_cov_1.417085_g306696_i0 PRJNA681822 308185 272 1.417085 3.8544712 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 65.1 2.21e-11   NR MBN1586083.1 2035772 g306696 i0 45.2 3.19852941176471 73 39 79.4 1 3 218 4 76 MBN1586083.1 RNA-binding protein [Candidatus Omnitrophota bacterium] diamond 870 65.1 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
29387392 29387392 PRJNA681822_P_NODE_52789_length_513_cov_1.765909_g51325_i0 PRJNA681822 52789 513 1.765909 9.05911317 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 107 1.2299999999999997e-23   NR MBZ0165397.1 2035772 g51325 i0 48.7 0.684210526315789 117 59 67.8 1 363 16 60 176 MBZ0165397.1 peptidoglycan DD-metalloendopeptidase family protein [Candidatus Omnitrophota bacterium] diamond 351 107 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;