RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA681822", tax_clade = "FCB group" and tax_phylum = "Candidatus Kapaibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Kapaibacteriota · 4 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 4 ✖

bioproject 1

  • PRJNA681822 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27018757 27018757 PRJNA681822_P_NODE_465562_length_243_cov_0.894118_g464072_i0 PRJNA681822 465562 243 0.894118 2.17270674 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 82 5.44e-16   NR MFN8359625.1 2447898 g464072 i0 48 1.91358024691358 75 39 92.6 0 2 226 796 870 MFN8359625.1 glycosyl hydrolase [Candidatus Kapaibacterium sp.] diamond 465 82 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
27113444 27113444 PRJNA681822_P_NODE_451002_length_244_cov_0.900585_g449512_i0 PRJNA681822 451002 244 0.900585 2.1974274 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 113 4.54e-31   NR HEX4937602.1 2447898 g449512 i0 100 0.663934426229508 54 0 66.4 0 3 164 14 67 HEX4937602.1 GMC oxidoreductase [Candidatus Kapaibacterium sp.] diamond 162 113 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
29987283 29987283 PRJNA681822_P_NODE_471191_length_242_cov_0.911243_g469701_i0 PRJNA681822 471191 242 0.911243 2.20520806 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 61.2 1.06e-8   NR HVZ40296.1 2447898 g469701 i0 40.7 1.00413223140496 81 43 94.2 2 228 1 131 211 HVZ40296.1 hypothetical protein [Candidatus Kapaibacterium sp.] diamond 243 61.2 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
30745504 30745504 PRJNA681822_P_NODE_243994_length_288_cov_1.260465_g242505_i0 PRJNA681822 243994 288 1.260465 3.6301392 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 71.6 4.76e-13   NR MCU0427521.1 2447898 g242505 i0 47.8 0.697916666666667 67 35 69.8 0 286 86 112 178 MCU0427521.1 hypothetical protein [Candidatus Kapaibacterium sp.] diamond 201 71.6 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;