RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA681822", tax_clade = "FCB group" and tax_phylum = "Candidatus Cloacimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Cloacimonadota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA681822 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27745651 27745651 PRJNA681822_P_NODE_480324_length_241_cov_0.916667_g478834_i0 PRJNA681822 480324 241 0.916667 2.20916747 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 42.7 0.0371   NR MDD3536280.1 2030808 g478834 i0 52.4 0.522821576763486 42 16 47.3 2 103 216 571 612 MDD3536280.1 CRISPR-associated helicase Cas3' [Candidatus Cloacimonadota bacterium] diamond 126 42.7 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
28661141 28661141 PRJNA681822_P_NODE_449947_length_244_cov_1.350877_g448457_i0 PRJNA681822 449947 244 1.350877 3.29613988 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 51.2 3.72e-5   NR MCB5252391.1 2030808 g448457 i0 85.7 0.688524590163934 28 4 34.4 0 85 2 1 28 MCB5252391.1 RagB/SusD family nutrient uptake outer membrane protein [Candidatus Cloacimonadota bacterium] diamond 168 51.2 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
30966864 30966864 PRJNA681822_P_NODE_434034_length_246_cov_0.890173_g432545_i0 PRJNA681822 434034 246 0.890173 2.18982558 Candidatus Cloacimonetes bacterium HGW-Cloacimonetes-1 2013733 Bacteria Bacteria 51.2 3.06e-5   NR PKN79908.1 2013733 g432545 i0 36.1 0.878048780487805 72 46 87.8 0 233 18 163 234 PKN79908.1 MAG: hypothetical protein CVU48_03795 [Candidatus Cloacimonetes bacterium HGW-Cloacimonetes-1] diamond 216 51.2 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonetes bacterium HGW-Cloacimonetes-1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;