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contig_metadata

33 rows where bioproject = "PRJNA681822", tax_clade = "Discoba" and tax_phylum = "Heterolobosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 33 ✖

tax_clade 1

  • Discoba · 33 ✖

bioproject 1

  • PRJNA681822 · 33 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
654638 654638 PRJNA681822_P_NODE_357881_length_258_cov_1.664865_g356392_i0 PRJNA681822 357881 258 1.664865 4.2953517 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 127 1.5199999999999996e-34   NR XP_002681841.1 5762 g356392 i0 69.4 7.90697674418605 85 26 98.8 0 2 256 95 179 XP_002681841.1 uncharacterized protein NAEGRDRAFT_3238, partial [Naegleria gruberi] diamond 2040 128 0.9921875 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
1170850 1170850 PRJNA681822_P_NODE_442521_length_245_cov_0.895349_g441032_i0 PRJNA681822 442521 245 0.895349 2.19360505 Naegleria 5761 Heterolobosea other_Eukaryota 119 2.15e-22   NTclustered gi|2031946985|emb|OD958550.1| 5763 g441032 i0 76.667 33.669387755102 240 40 98 11 1 240 3004 3227 Naegleria fowleri Karachi_NF001 strain blastn 8249 119 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
4999150 4999150 PRJNA681822_P_NODE_386964_length_251_cov_0.865169_g385475_i0 PRJNA681822 386964 251 0.865169 2.17157419 Naegleria 5761 Heterolobosea other_Eukaryota 464 2.47e-126   NTclustered gi|2651357780|gb|PP174296.1| 36333 g385475 i0 100 39.1235059760956 251 0 100 0 1 251 2128 2378 Naegleria clarki isolate P2881 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 9820 464 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria clarki
6274920 6274920 PRJNA681822_P_NODE_462205_length_243_cov_0.905882_g460715_i0 PRJNA681822 462205 243 0.905882 2.20129326 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 78.7 3.61e-10   NTclustered gi|290996517|ref|XM_002680783.1| 5762 g460715 i0 97.778 1.20987654320988 45 1 19 0 194 238 1569 1525 Naegleria gruberi myosin (NAEGRDRAFT_35518), partial mRNA blastn 294 78.7 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
7548204 7548204 PRJNA681822_P_NODE_24706_length_764_cov_1.052098_g23407_i0 PRJNA681822 24706 764 1.052098 8.03802872 Naegleria 5761 Heterolobosea other_Eukaryota 1356 0   NTclustered gi|2618963742|gb|OR769034.1| 5762 g23407 i0 98.691 24.6544502617801 764 10 100 0 1 764 3616 4379 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 18836 1356 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
8823219 8823219 PRJNA681822_P_NODE_228807_length_292_cov_1.584475_g227318_i0 PRJNA681822 228807 292 1.584475 4.626667 Naegleria 5761 Heterolobosea other_Eukaryota 540 4.74e-149   NTclustered gi|2651357798|gb|PP174311.1| 37103 g227318 i0 100 24.2705479452055 292 0 100 0 1 292 2988 2697 Naegleria sp. isolate 33 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 7087 540 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria sp.
10855411 10855411 PRJNA681822_P_NODE_104449_length_386_cov_1.150160_g102964_i0 PRJNA681822 104449 386 1.15016 4.4396176 Acrasis kona 1008807 Heterolobosea other_Eukaryota 142 6.08e-40   NR KAL0489093.1 1008807 g102964 i0 65.9 1.00259067357513 129 35 99.5 3 386 3 51 171 KAL0489093.1 ribosomal protein S8 [Acrasis kona] diamond 387 142 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
10857351 10857351 PRJNA681822_P_NODE_238609_length_289_cov_1.425926_g237120_i0 PRJNA681822 238609 289 1.425926 4.12092614 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 145 4.29e-30   NTclustered gi|290987211|ref|XM_002676271.1| 5762 g237120 i0 79.703 2.05190311418685 202 39 70 2 62 262 2 202 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_39465), mRNA blastn 593 145 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
14683507 14683507 PRJNA681822_P_NODE_330312_length_266_cov_1.419689_g328823_i0 PRJNA681822 330312 266 1.419689 3.77637274 Acrasis kona 1008807 Heterolobosea other_Eukaryota 179 6.649999999999998e-56   NR KAL0490665.1 1008807 g328823 i0 90.9 0.992481203007519 88 8 99.2 0 1 264 30 117 KAL0490665.1 ubiquitin conjugating enzyme E2 [Acrasis kona] diamond 264 179 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
15199901 15199901 PRJNA681822_P_NODE_90392_length_406_cov_2.099099_g88910_i0 PRJNA681822 90392 406 2.099099 8.52234194 Naegleria 5761 Heterolobosea other_Eukaryota 726 0   NTclustered gi|2351573|gb|U80061.1|NJU80061 36335 g88910 i0 98.768 97.5911330049261 406 5 100 0 1 406 1433 1838 Naegleria jamiesoni 18S ribosomal RNA gene, partial sequence blastn 39622 726 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria jamiesoni
15199956 15199956 PRJNA681822_S_NODE_2052_length_152_cov_2.325203_g2027_i0 PRJNA681822 2052 152 2.325203 3.53430856 Naegleria 5761 Heterolobosea other_Eukaryota 217 4.16e-52   NTclustered gi|2476253407|gb|OQ627480.1| 51634 g2027 i0 92.667 11.2105263157895 150 11 99 0 3 152 4104 4253 Naegleria australiensis strain PP397 rDNA-containing extrachromosomal element genomic sequence; small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence; and non-ribosomal sequence blastn 1704 217 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria australiensis
16473780 16473780 PRJNA681822_P_NODE_473913_length_242_cov_0.911243_g472423_i0 PRJNA681822 473913 242 0.911243 2.20520806 Acrasis kona 1008807 Heterolobosea other_Eukaryota 109 1.7299999999999999e-28   NR KAL0485856.1 1008807 g472423 i0 72 1.01652892561983 82 21 99.2 1 3 242 54 135 KAL0485856.1 ribosomal protein S17 [Acrasis kona] diamond 246 109 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
16474006 16474006 PRJNA681822_P_NODE_74113_length_439_cov_1.530055_g72635_i0 PRJNA681822 74113 439 1.530055 6.71694145 Naegleria 5761 Heterolobosea other_Eukaryota 806 0   NTclustered gi|2618963742|gb|OR769034.1| 5762 g72635 i0 99.772 93.6378132118451 439 1 100 0 1 439 455 17 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 41107 811 0.99383477188656 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
18506699 18506699 PRJNA681822_P_NODE_340755_length_263_cov_1.542105_g339266_i0 PRJNA681822 340755 263 1.542105 4.05573615 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 448 2.6199999999999995e-121   NTclustered gi|290983829|ref|XM_002674585.1| 5762 g339266 i0 97.338 2.00760456273764 263 7 100 0 1 263 290 28 Naegleria gruberi ribosomal protein L34e (NAEGRDRAFT_58709), mRNA blastn 528 448 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
18507314 18507314 PRJNA681822_P_NODE_393775_length_250_cov_0.870056_g392286_i0 PRJNA681822 393775 250 0.870056 2.17514 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 244 3.48e-60   NTclustered gi|256665305|gb|AC237576.1| 5762 g392286 i0 84.4 28.924 250 37 99 2 1 249 2151 2399 Naegleria gruberi clone JGIBCCN-9M20, complete sequence blastn 7231 244 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
19023126 19023126 PRJNA681822_S_NODE_1695_length_165_cov_2.044118_g1670_i0 PRJNA681822 1695 165 2.044118 3.3727947 Naegleria 5761 Heterolobosea other_Eukaryota 305 9.59e-79   NTclustered gi|399764194|gb|JQ271705.1| 36333 g1670 i0 100 99.8848484848485 165 0 100 0 1 165 2436 2272 Naegleria clarki strain TMR 18S ribosomal RNA gene, partial sequence blastn 16481 305 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria clarki
22329739 22329739 PRJNA681822_P_NODE_166498_length_329_cov_2.707031_g165010_i0 PRJNA681822 166498 329 2.707031 8.90613199 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 335 2.749999999999999e-87   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g165010 i0 85.196 3.86626139817629 331 44 100 2 1 329 2752 2425 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 1272 335 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
22332605 22332605 PRJNA681822_P_NODE_393718_length_250_cov_0.870056_g392229_i0 PRJNA681822 393718 250 0.870056 2.17514 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 315 2.62e-81   NTclustered gi|290988973|ref|XM_002677099.1| 5762 g392229 i0 90.456 19.356 241 20 96 3 1 240 283 521 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_55776), mRNA blastn 4839 315 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
23609671 23609671 PRJNA681822_P_NODE_60099_length_482_cov_1.491443_g58629_i0 PRJNA681822 60099 482 1.491443 7.18875526 Vahlkampfia avara 74082 Heterolobosea other_Eukaryota 885 0   NTclustered gi|399764212|gb|JQ271723.1| 74082 g58629 i0 99.793 56.0809128630705 482 1 100 0 1 482 1323 1804 Vahlkampfia avara strain 4171L 18S ribosomal RNA gene, partial sequence blastn 27031 885 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Vahlkampfia Vahlkampfia avara
26955261 26955261 PRJNA681822_P_NODE_242922_length_288_cov_1.432558_g241433_i0 PRJNA681822 242922 288 1.432558 4.12576704 Acrasis kona 1008807 Heterolobosea other_Eukaryota 102 4.26e-23   NR KAL0488125.1 1008807 g241433 i0 48.4 0.989583333333333 95 48 99 1 2 286 70 163 KAL0488125.1 transmembrane and TPR repeat-containing protein [Acrasis kona] diamond 285 102 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
26986935 26986935 PRJNA681822_P_NODE_119862_length_368_cov_1.555932_g118375_i0 PRJNA681822 119862 368 1.555932 5.72582976 Acrasis kona 1008807 Heterolobosea other_Eukaryota 107 4.37e-26   NR KAL0489358.1 1008807 g118375 i0 51.3 0.9375 115 50 88.9 2 5 331 122 236 KAL0489358.1 vacuolar protein sorting protein VPS28 [Acrasis kona] diamond 345 107 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
27018718 27018718 PRJNA681822_P_NODE_165502_length_330_cov_1.719844_g164014_i0 PRJNA681822 165502 330 1.719844 5.6754852 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 87.4 1.18e-17   NR XP_002682230.1 5762 g164014 i0 40 1.04545454545455 115 62 98.2 2 326 3 35 149 XP_002682230.1 uncharacterized protein NAEGRDRAFT_78015 [Naegleria gruberi] diamond 345 87.4 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
27030466 27030466 PRJNA681822_P_NODE_274022_length_281_cov_0.947115_g272533_i0 PRJNA681822 274022 281 0.947115 2.66139315 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 109 8.810000000000001e-27   NR XP_002675028.1 5762 g272533 i0 69.7 2.45551601423488 76 22 80.1 1 57 281 93 168 XP_002675028.1 uncharacterized protein NAEGRDRAFT_58587 [Naegleria gruberi] diamond 690 109 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
27062110 27062110 PRJNA681822_P_NODE_41802_length_577_cov_2.476190_g40367_i0 PRJNA681822 41802 577 2.47619 14.2876163 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 204 2.15e-59   NR XP_044558917.1 5763 g40367 i0 51.3 12.8526863084922 189 89 98.3 1 568 2 258 443 XP_044558917.1 uncharacterized protein FDP41_006814 [Naegleria fowleri] diamond 7416 204 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
27283451 27283451 PRJNA681822_P_NODE_445123_length_245_cov_0.895349_g443634_i0 PRJNA681822 445123 245 0.895349 2.19360505 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 48.5 3.32e-4   NR XP_044556590.1 5763 g443634 i0 39.6 2.14285714285714 53 29 64.9 1 166 8 74 123 XP_044556590.1 uncharacterized protein FDP41_010097 [Naegleria fowleri] diamond 525 48.9 0.991820040899796 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
27473002 27473002 PRJNA681822_P_NODE_340483_length_263_cov_1.621053_g338994_i0 PRJNA681822 340483 263 1.621053 4.26336939 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 46.2 8.96e-4   NR CAG4708073.1 5763 g338994 i0 41.7 3.38783269961977 60 35 68.4 0 84 263 11 70 CAG4708073.1 unnamed protein product [Naegleria fowleri] diamond 891 46.6 0.991416309012876 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
28850290 28850290 PRJNA681822_P_NODE_384928_length_251_cov_0.865169_g383439_i0 PRJNA681822 384928 251 0.865169 2.17157419 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 160 1.41e-44   NR XP_002682516.1 5762 g383439 i0 98.8 0.99203187250996006 83 1 99.2 0 251 3 465 547 XP_002682516.1 uncharacterized protein NAEGRDRAFT_62385 [Naegleria gruberi] diamond 249 160 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
29766007 29766007 PRJNA681822_P_NODE_464591_length_243_cov_0.905882_g463101_i0 PRJNA681822 464591 243 0.905882 2.20129326 Acrasis kona 1008807 Heterolobosea other_Eukaryota 42.4 0.0376   NR KAL0484887.1 1008807 g463101 i0 39.6 0.654320987654321 53 31 64.2 1 3 158 84 136 KAL0484887.1 OPI10 [Acrasis kona] diamond 159 42.4 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
30113534 30113534 PRJNA681822_P_NODE_428512_length_246_cov_2.184971_g427023_i0 PRJNA681822 428512 246 2.184971 5.37502866 Acrasis kona 1008807 Heterolobosea other_Eukaryota 59.7 3.75e-8   NR KAL0486433.1 1008807 g427023 i0 51.1 0.573170731707317 47 23 57.3 0 105 245 274 320 KAL0486433.1 sulfite reductase [Acrasis kona] diamond 141 59.7 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
30978597 30978597 PRJNA681822_P_NODE_461994_length_243_cov_0.905882_g460504_i0 PRJNA681822 461994 243 0.905882 2.20129326 Naegleria 5761 Heterolobosea other_Eukaryota 131 2.76e-33   NR XP_002679205.1 5762 g460504 i0 84.5 1.8641975308642 71 11 87.7 0 215 3 468 538 XP_002679205.1 uncharacterized protein NAEGRDRAFT_38509 [Naegleria gruberi] diamond 453 131 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
31251053 31251053 PRJNA681822_P_NODE_438655_length_245_cov_1.790698_g437166_i0 PRJNA681822 438655 245 1.790698 4.3872101 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 82.4 4.13e-16   NR XP_002669325.1 5762 g437166 i0 43.6 1.89795918367347 78 44 95.5 0 234 1 562 639 XP_002669325.1 uncharacterized protein NAEGRDRAFT_75725 [Naegleria gruberi] diamond 465 82.4 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
31504317 31504317 PRJNA681822_P_NODE_476936_length_241_cov_1.726190_g475446_i0 PRJNA681822 476936 241 1.72619 4.1601179 Acrasis kona 1008807 Heterolobosea other_Eukaryota 50.4 8.18e-6   NR KAL0486669.1 1008807 g475446 i0 45.9 1.44398340248963 61 32 74.7 1 240 61 36 96 KAL0486669.1 developmentally-regulated external PM-anchored protein [Acrasis kona] diamond 348 50.4 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
31915260 31915260 PRJNA681822_P_NODE_240877_length_289_cov_0.782407_g239388_i0 PRJNA681822 240877 289 0.782407 2.26115623 Acrasis kona 1008807 Heterolobosea other_Eukaryota 126 2.75e-34   NR KAL0485778.1 1008807 g239388 i0 63.2 0.986159169550173 95 35 98.6 0 2 286 52 146 KAL0485778.1 5 TM domain-containing transmembrane protein [Acrasis kona] diamond 285 126 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;