RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA681822", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA681822 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31326043 31326043 PRJNA681822_P_NODE_350675_length_260_cov_1.647059_g349186_i0 PRJNA681822 350675 260 1.647059 4.2823534 Bacteria 2 Bacteria Bacteria 58.2 2.4e-8   NR MFA5997592.1 2053589 g349186 i0 35.6 1.5 73 43 84.2 1 239 21 68 136 MFA5997592.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 390 58.2 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31978535 31978535 PRJNA681822_P_NODE_368418_length_255_cov_1.554945_g366929_i0 PRJNA681822 368418 255 1.554945 3.96510975 Minisyncoccota bacterium 2053589 Bacteria Bacteria 83.2 1.03e-18   NR MDR3572201.1 2053589 g366929 i0 87.2 0.552941176470588 47 6 55.3 0 253 113 42 88 MDR3572201.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 141 83.2 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;