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contig_metadata

5 rows where bioproject = "PRJNA681822", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Rokuibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Rokuibacteriota · 5 ✖

tax_clade 1

  • Bacteria candidate phyla · 5 ✖

bioproject 1

  • PRJNA681822 · 5 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1170250 1170250 PRJNA681822_P_NODE_248541_length_287_cov_1.168224_g247052_i0 PRJNA681822 248541 287 1.168224 3.35280288 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 192 4.310000000000001e-59   NR PYN43001.1 2053607 g247052 i0 97.9 0.982578397212544 94 2 98.3 0 284 3 39 132 PYN43001.1 MAG: hypothetical protein DME00_27875, partial [Candidatus Rokuibacteriota bacterium] diamond 282 192 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
2446325 2446325 PRJNA681822_P_NODE_460122_length_243_cov_0.905882_g458632_i0 PRJNA681822 460122 243 0.905882 2.20129326 Pseudomonadati 3379134 Bacteria Bacteria 156 4.68e-42   NR MBM4443122.1 2053607 g458632 i0 93.4 2.81481481481481 76 5 93.8 0 229 2 554 629 MBM4443122.1 indolepyruvate ferredoxin oxidoreductase family protein [Candidatus Rokuibacteriota bacterium] diamond 684 157 0.993630573248408 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
21572528 21572528 PRJNA681822_P_NODE_247397_length_287_cov_1.425234_g245908_i0 PRJNA681822 247397 287 1.425234 4.09042158 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 175 4.62e-50   NR MBM3221892.1 2053607 g245908 i0 90.5 0.993031358885017 95 9 99.3 0 286 2 253 347 MBM3221892.1 acyl-CoA carboxylase subunit beta [Candidatus Rokuibacteriota bacterium] diamond 285 175 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
22330894 22330894 PRJNA681822_P_NODE_248718_length_287_cov_1.112150_g247229_i0 PRJNA681822 248718 287 1.11215 3.1918705 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 191 3.2799999999999997e-56   NR MBM3219383.1 2053607 g247229 i0 97.9 1.98606271777003 95 2 99.3 0 286 2 90 184 MBM3219383.1 hypothetical protein [Candidatus Rokuibacteriota bacterium] diamond 570 191 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
31314315 31314315 PRJNA681822_P_NODE_220355_length_296_cov_2.959641_g218866_i0 PRJNA681822 220355 296 2.959641 8.76053736 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 50.8 8.6700000000000007e-05   NR MBI2162004.1 2053607 g218866 i0 54.1 0.689189189189189 37 17 37.5 0 294 184 71 107 MBI2162004.1 universal stress protein [Candidatus Rokuibacteriota bacterium] diamond 204 50.8 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;