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contig_metadata

12 rows where bioproject = "PRJNA681822", tax_clade = "Amoebozoa" and tax_phylum = "Tubulinea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Tubulinea · 12 ✖

tax_clade 1

  • Amoebozoa · 12 ✖

bioproject 1

  • PRJNA681822 · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
653209 653209 PRJNA681822_P_NODE_232141_length_291_cov_0.903670_g230652_i0 PRJNA681822 232141 291 0.90367 2.6296797 Cryptodifflugia operculata 1078836 Tubulinea other_Eukaryota 449 8.180000000000001e-122   NTclustered gi|345452574|gb|JF694305.1| 1078836 g230652 i0 94.502 71.2783505154639 291 16 100 0 1 291 703 413 Cryptodifflugia operculata clone 9 actin gene, partial cds blastn 20742 449 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Cryptodifflugiidae Cryptodifflugia Cryptodifflugia operculata
1170543 1170543 PRJNA681822_P_NODE_342741_length_262_cov_2.280423_g341252_i0 PRJNA681822 342741 262 2.280423 5.97470826 Cryptodifflugia operculata 1078836 Tubulinea other_Eukaryota 139 8.219999999999999e-40   NR AFX73059.1 1078836 g341252 i0 81.4 0.984732824427481 86 16 98.5 0 260 3 64 149 AFX73059.1 14-3-3 protein, partial [Cryptodifflugia operculata] diamond 258 139 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Cryptodifflugiidae Cryptodifflugia Cryptodifflugia operculata
2446081 2446081 PRJNA681822_P_NODE_37662_length_610_cov_2.668529_g36240_i0 PRJNA681822 37662 610 2.668529 16.2780269 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 630 6.0999999999999996e-176   NTclustered gi|33946352|gb|AY294155.1| 242547 g36240 i0 86.69 88.9229508196721 571 72 93 4 5 573 607 39 Glaeseria mira actin mRNA, partial cds blastn 54243 630 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Glaeseria Glaeseria mira
7031189 7031189 PRJNA681822_P_NODE_181766_length_319_cov_1.739837_g180278_i0 PRJNA681822 181766 319 1.739837 5.55008003 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 590 5.1299999999999986e-164   NTclustered gi|2402051306|gb|OP984113.1| 5778 g180278 i0 100 100 319 0 100 0 1 319 392 74 Vermamoeba vermiformis clone AD4C_R small subunit ribosomal RNA gene, partial sequence blastn 31900 590 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
12131205 12131205 PRJNA681822_P_NODE_137610_length_351_cov_5.500000_g136122_i0 PRJNA681822 137610 351 5.5 19.305 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 638 1.9999999999999996e-178   NTclustered gi|300078496|gb|GU001158.1| 5778 g136122 i0 99.43 50.2022792022792 351 2 100 0 1 351 4027 4377 Hartmannella vermiformis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 17621 638 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
12132756 12132756 PRJNA681822_P_NODE_241150_length_288_cov_2.381395_g239661_i0 PRJNA681822 241150 288 2.381395 6.8584176 Cryptodifflugia operculata 1078836 Tubulinea other_Eukaryota 499 7.92e-137   NTclustered gi|345452574|gb|JF694305.1| 1078836 g239661 i0 97.917 97.3923611111111 288 6 100 0 1 288 161 448 Cryptodifflugia operculata clone 9 actin gene, partial cds blastn 28049 499 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Cryptodifflugiidae Cryptodifflugia Cryptodifflugia operculata
12136268 12136268 PRJNA681822_P_NODE_66290_length_461_cov_1.481959_g64816_i0 PRJNA681822 66290 461 1.481959 6.83183099 Cryptodifflugia operculata 1078836 Tubulinea other_Eukaryota 394 6.45e-105   NTclustered gi|421976286|gb|JQ519399.1| 1078836 g64816 i0 88.308 14.3492407809111 325 38 70 0 137 461 475 151 Cryptodifflugia operculata clone JG11.5_7 14-3-3 protein gene, partial cds blastn 6615 394 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Cryptodifflugiidae Cryptodifflugia Cryptodifflugia operculata
13407284 13407284 PRJNA681822_P_NODE_23371_length_785_cov_3.271067_g22095_i0 PRJNA681822 23371 785 3.271067 25.67787595 Cryptodifflugia operculata 1078836 Tubulinea other_Eukaryota 1013 0   NTclustered gi|2651357777|gb|PP174294.1| 1078836 g22095 i0 89.975 35.8662420382166 788 74 100 5 1 785 3038 2253 Cryptodifflugia operculata isolate 75 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 28155 1013 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Cryptodifflugiidae Cryptodifflugia Cryptodifflugia operculata
19780198 19780198 PRJNA681822_P_NODE_23656_length_780_cov_6.721358_g22372_i0 PRJNA681822 23656 780 6.721358 52.4265924 Cryptodifflugia operculata 1078836 Tubulinea other_Eukaryota 1020 0   NTclustered gi|345452574|gb|JF694305.1| 1078836 g22372 i0 95.069 94.1076923076923 649 30 83 2 133 780 795 148 Cryptodifflugia operculata clone 9 actin gene, partial cds blastn 73404 1020 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Cryptodifflugiidae Cryptodifflugia Cryptodifflugia operculata
22329198 22329198 PRJNA681822_P_NODE_131798_length_357_cov_1.084507_g130311_i0 PRJNA681822 131798 357 1.084507 3.87168999 Cryptodifflugia operculata 1078836 Tubulinea other_Eukaryota 243 1.8700000000000001e-59   NTclustered gi|421976286|gb|JQ519399.1| 1078836 g130311 i0 82.784 3.40336134453782 273 45 76 2 84 355 74 345 Cryptodifflugia operculata clone JG11.5_7 14-3-3 protein gene, partial cds blastn 1215 243 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Cryptodifflugiidae Cryptodifflugia Cryptodifflugia operculata
24122441 24122441 PRJNA681822_P_NODE_32159_length_664_cov_2.304569_g30767_i0 PRJNA681822 32159 664 2.304569 15.30233816 Vermamoeba 1260114 Tubulinea other_Eukaryota 1116 0   NTclustered gi|909719645|gb|KT185625.1| 5778 g30767 i0 96.997 56.480421686747 666 16 100 3 1 664 5773 5110 Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 37503 1116 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
30461580 30461580 PRJNA681822_P_NODE_380953_length_251_cov_1.730337_g379464_i0 PRJNA681822 380953 251 1.730337 4.34314587 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 61.6 9.72e-10   NR ABD72565.1 5778 g379464 i0 80 0.418326693227092 35 7 41.8 0 106 2 2 36 ABD72565.1 chitinase-like protein cluster B, partial [Vermamoeba vermiformis] diamond 105 61.6 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;