RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA680334", tax_clade = "Opisthokonta" and tax_phylum = "Chytridiomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 7 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 7 ✖

bioproject 1

  • PRJNA680334 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24121201 24121201 PRJNA680334_S_NODE_36699_length_211_cov_3.522472_g36213_i0 PRJNA680334 36699 211 3.522472 7.43241592 Gallinipes 2304323 Fungi Fungi 353 4.54e-93   NTclustered gi|291010791|gb|GQ499381.1| 117822 g36213 i0 97.129 99.2511848341232 209 6 99 0 1 209 236 28 Spizellomyces pseudodichotomus 28S ribosomal RNA gene, partial sequence blastn 20942 353 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Gallinipes Gallinipes pseudodichotomus
26638735 26638735 PRJNA680334_S_NODE_35381_length_213_cov_8.227778_g34895_i0 PRJNA680334 35381 213 8.227778 17.52516714 Blyttiomyces sp. JEL 2750429 Fungi Fungi 68.9 1.46e-11   NR KAJ3314470.1 2724214 g34895 i0 52.6 3.32394366197183 57 27 80.3 0 3 173 1344 1400 KAJ3314470.1 hypothetical protein HDU76_002415 [Blyttiomyces sp. JEL0837] diamond 708 68.9 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes     Blyttiomyces Blyttiomyces sp. JEL0837
26733393 26733393 PRJNA680334_S_NODE_106921_length_150_cov_3.102564_g106435_i0 PRJNA680334 106921 150 3.102564 4.653846 Rhizophlyctis rosea 64517 Fungi Fungi 71.2 5.23e-14   NR KAJ3056097.1 64517 g106435 i0 75.5 0.98 49 12 98 0 2 148 92 140 KAJ3056097.1 hypothetical protein HK097_008133 [Rhizophlyctis rosea] diamond 147 71.2 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea
27303358 27303358 PRJNA680334_S_NODE_89763_length_159_cov_2.325397_g89277_i0 PRJNA680334 89763 159 2.325397 3.69738123 Gaertneriomyces semiglobifer 109897 Fungi Fungi 100 2.1499999999999994e-23   NR KAI9009675.1 109897 g89277 i0 84.9 5 53 8 100 0 159 1 367 419 KAI9009675.1 ornithine aminotransferase [Gaertneriomyces semiglobifer] diamond 795 100 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Gaertneriomyces Gaertneriomyces semiglobifer
27820416 27820416 PRJNA680334_S_NODE_100184_length_153_cov_4.733333_g99698_i0 PRJNA680334 100184 153 4.733333 7.24199949 Rhizophydiales 451442 Fungi Fungi 82.4 9.25e-17   NR KAJ3261038.1 261099 g99698 i0 70.2 3.6078431372549 47 14 92.2 0 2 142 235 281 KAJ3261038.1 cytosolic factor, phosphatidylinositol/phosphatidylcholine transfer protein [Boothiomyces macroporosus] diamond 552 82.4 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales Terramycetaceae Boothiomyces Boothiomyces macroporosus
28787068 28787068 PRJNA680334_S_NODE_101487_length_153_cov_1.508333_g101001_i0 PRJNA680334 101487 153 1.508333 2.30774949 Blyttiomyces sp. JEL 2750429 Fungi Fungi 43.5 0.00606   NR KAJ3324702.1 2724214 g101001 i0 54.5 1.43137254901961 33 15 64.7 0 1 99 892 924 KAJ3324702.1 hypothetical protein HDU76_013345 [Blyttiomyces sp. JEL0837] diamond 219 43.5 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes     Blyttiomyces Blyttiomyces sp. JEL0837
31768840 31768840 PRJNA680334_S_NODE_64157_length_177_cov_3.312500_g63671_i0 PRJNA680334 64157 177 3.3125 5.863125 Fungi 4751 Fungi Fungi 60.1 9.35e-9   NR TPX59042.1 109895 g63671 i0 54.5 1.86440677966102 55 25 93.2 0 165 1 195 249 TPX59042.1 1-acylglycerol-3-phosphate O-acyltransferase [Powellomyces hirtus] diamond 330 60.1 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Powellomyces Powellomyces hirtus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;