RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA680334", tax_clade = "Cyanobacteriota/Melainabacteria group" and tax_phylum = "Candidatus Melainabacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 4 ✖

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 4 ✖

bioproject 1

  • PRJNA680334 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29639477 29639477 PRJNA680334_S_NODE_51490_length_190_cov_2.910828_g51004_i0 PRJNA680334 51490 190 2.910828 5.5305732 Candidatus Caenarcanales bacterium 2729995 Bacteria Bacteria 90.5 2.75e-22   NR HEY9847579.1 2729995 g51004 i0 81.1 3.37894736842105 53 10 83.7 0 5 163 8 60 HEY9847579.1 hypothetical protein [Candidatus Caenarcanales bacterium] diamond 642 90.5 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria Vampirovibriophyceae Candidatus Caenarcanales     Candidatus Caenarcanales bacterium
29841033 29841033 PRJNA680334_S_NODE_102571_length_152_cov_3.394958_g102085_i0 PRJNA680334 102571 152 3.394958 5.16033616 Bacillati 1783272 Bacteria Bacteria 80.9 3.48e-16   NR RTL38399.1 2052166 g102085 i0 78.3 2.72368421052632 46 10 90.8 0 6 143 243 288 RTL38399.1 MAG: MFS transporter [Candidatus Melainabacteria bacterium] diamond 414 81.6 0.991421568627451 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
30618996 30618996 PRJNA680334_S_NODE_41133_length_204_cov_2.087719_g40647_i0 PRJNA680334 41133 204 2.087719 4.25894676 Candidatus Obscuribacter sp. 2711154 Bacteria Bacteria 71.6 1.04e-14   NR HMY52145.1 2711154 g40647 i0 77.8 0.661764705882353 45 10 66.2 0 142 8 1 45 HMY52145.1 hypothetical protein [Candidatus Obscuribacter sp.] diamond 135 71.6 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales Candidatus Obscuribacteraceae Candidatus Obscuribacter Candidatus Obscuribacter sp.
32611157 32611157 PRJNA680334_S_NODE_13980_length_283_cov_32.416000_g13494_i0 PRJNA680334 13980 283 32.416 91.73728 Candidatus Melainabacteria bacterium HGW-Melainabacteria-1 2013813 Bacteria Bacteria 128 7.780000000000001e-33   NR PKL79379.1 2013813 g13494 i0 76.2 0.890459363957597 84 20 89 0 279 28 43 126 PKL79379.1 MAG: hypothetical protein CVV27_01985, partial [Candidatus Melainabacteria bacterium HGW-Melainabacteria-1] diamond 252 128 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium HGW-Melainabacteria-1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;