RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where bioproject = "PRJNA680334", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Nomuraibacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Nomuraibacteriota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA680334 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1926433 1926433 PRJNA680334_S_NODE_77182_length_167_cov_2.201493_g76696_i0 PRJNA680334 77182 167 2.201493 3.67649331 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 255 9.950000000000001e-64   NTclustered gi|2258865392|gb|CP060227.1| 2052152 g76696 i0 95.062 3.89820359281437 162 8 97 0 3 164 429369 429530 MAG: Candidatus Nomurabacteria bacterium isolate HK-STAS-PATE-22 chromosome, complete genome blastn 651 255 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
30567340 30567340 PRJNA680334_S_NODE_36093_length_212_cov_4.162011_g35607_i0 PRJNA680334 36093 212 4.162011 8.82346332 Bacteria 2 Bacteria Bacteria 125 1.8799999999999999e-31   NR MCB9811196.1 2052152 g35607 i0 81.4 1.9811320754717 70 13 99.1 0 2 211 708 777 MCB9811196.1 ATP-dependent Clp protease ATP-binding subunit [Candidatus Nomurabacteria bacterium] diamond 420 125 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
30998300 30998300 PRJNA680334_S_NODE_94694_length_156_cov_3.300813_g94208_i0 PRJNA680334 94694 156 3.300813 5.14926828 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 102 3.94e-24   NR USN87828.1 2052152 g94208 i0 86 2.86538461538462 50 7 96.2 0 2 151 46 95 USN87828.1 MAG: DUF4215 domain-containing protein [Candidatus Nomurabacteria bacterium] diamond 447 102 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
31504235 31504235 PRJNA680334_S_NODE_50536_length_191_cov_3.620253_g50050_i0 PRJNA680334 50536 191 3.620253 6.91468323 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 53.1 3.91e-6   NR MCB9810901.1 2052152 g50050 i0 44.6 0.879581151832461 56 31 88 0 186 19 150 205 MCB9810901.1 insulinase family protein [Candidatus Nomurabacteria bacterium] diamond 168 53.1 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;