RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA675638", tax_kingdom = "Metazoa" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA675638 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12127902 12127902 PRJNA675638_S_NODE_810_length_568_cov_1.549133_g752_i0 PRJNA675638 810 568 1.549133 8.79907544 Montipora capricornis 246305 Cnidaria other_Eukaryota 58.4 0.001   NTclustered gi|2812114944|ref|XM_068870257.1| 246305 g752 i0 97.059 0.0598591549295775 34 1 6 0 264 297 145 178 PREDICTED: Montipora capricornis nucleolar transcription factor 1-A-like (LOC138023236), mRNA blastn 34 58.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Montipora Montipora capricornis
19775369 19775369 PRJNA675638_P_NODE_1836_length_494_cov_1.719101_g1642_i0 PRJNA675638 1836 494 1.719101 8.49235894 Montipora capricornis 246305 Cnidaria other_Eukaryota 58.4 0.001   NTclustered gi|2812114944|ref|XM_068870257.1| 246305 g1642 i0 97.059 0.975708502024291 34 1 7 0 312 345 178 145 PREDICTED: Montipora capricornis nucleolar transcription factor 1-A-like (LOC138023236), mRNA blastn 482 58.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Montipora Montipora capricornis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;