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contig_metadata

8 rows where bioproject = "PRJNA675638", tax_clade = "Opisthokonta" and tax_phylum = "Mollusca"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 8 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 8 ✖

bioproject 1

  • PRJNA675638 · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4476498 4476498 PRJNA675638_P_NODE_17144_length_172_cov_5.227642_g16947_i0 PRJNA675638 17144 172 5.227642 8.99154424 Mytilus edulis 6550 Mollusca Mollusca 52.8 0.014   NTclustered gi|2912389365|ref|XM_071307228.1| 6550 g16947 i0 92.105 0.22093023255814 38 2 22 1 96 132 1830 1867 PREDICTED: Mytilus edulis succinyl-CoA:acetate/propanoyl-CoA:succinate CoA transferase-like (LOC139516862), mRNA blastn 38 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
8301837 8301837 PRJNA675638_P_NODE_15027_length_185_cov_1.485294_g14830_i0 PRJNA675638 15027 185 1.485294 2.7477939 Bradybaena similaris 145626 Mollusca Mollusca 56.5 0.001   NTclustered gi|2912987826|dbj|AP039592.1| 145626 g14830 i0 97.059 0.183783783783784 34 0 18 1 44 76 10695198 10695165 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 11, sequence blastn 34 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
10097638 10097638 PRJNA675638_P_NODE_20928_length_163_cov_0.894737_g20731_i0 PRJNA675638 20928 163 0.894737 1.45842131 Haliotis 6452 Mollusca Mollusca 141 2.82e-29   NTclustered gi|2187575398|ref|XM_046482534.1| 6454 g20731 i0 82.317 2.90184049079755 164 27 100 2 1 163 537 375 PREDICTED: Haliotis rufescens actin-related protein 3-A (LOC124119868), mRNA blastn 473 141 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis rufescens
12648256 12648256 PRJNA675638_P_NODE_17430_length_171_cov_1.254098_g17233_i0 PRJNA675638 17430 171 1.254098 2.14450758 Mytilus 6548 Mollusca Mollusca 52.8 0.014   NTclustered gi|2912317536|ref|XR_011664550.1| 6550 g17233 i0 100 1.47368421052632 28 0 16 0 99 126 420 393 PREDICTED: Mytilus edulis uncharacterized lncRNA (LOC139523032), ncRNA blastn 252 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
15197532 15197532 PRJNA675638_P_NODE_9012_length_232_cov_1.098361_g8815_i0 PRJNA675638 9012 232 1.098361 2.54819752 Magallana 147004 Mollusca Mollusca 52.8 0.021   NTclustered gi|2751300191|ref|XM_011422615.4| 29159 g8815 i0 100 0.241379310344828 28 0 12 0 193 220 257 230 PREDICTED: Magallana gigas tubulin polymerization-promoting protein family member 3 (LOC105323555), mRNA blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Magallana Magallana gigas
24874609 24874609 PRJNA675638_P_NODE_12920_length_198_cov_2.583893_g12723_i0 PRJNA675638 12920 198 2.583893 5.11610814 Pecten maximus 6579 Mollusca Mollusca 54.7 0.005   NTclustered gi|1835502822|ref|XM_033884497.1| 6579 g12723 i0 86.538 1.23232323232323 52 4 26 3 75 125 3816 3865 PREDICTED: Pecten maximus PR domain zinc finger protein 1-like (LOC117327487), transcript variant X2, mRNA blastn 244 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Pecten Pecten maximus
27902984 27902984 PRJNA675638_P_NODE_10445_length_217_cov_2.422619_g10248_i0 PRJNA675638 10445 217 2.422619 5.25708323 Saccostrea cuccullata 36930 Mollusca Mollusca 47 7.9e-4   NR XP_062599881.1 36930 g10248 i0 32.2 0.815668202764977 59 40 81.6 0 24 200 21 79 XP_062599881.1 uncharacterized protein LOC134261454 [Saccostrea cuccullata] diamond 177 47 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Saccostrea Saccostrea cuccullata
29797498 29797498 PRJNA675638_S_NODE_2691_length_263_cov_3.023364_g2629_i0 PRJNA675638 2691 263 3.023364 7.95144732 Haliotis asinina 109174 Mollusca Mollusca 43.5 0.0241   NR XP_067657806.1 109174 g2629 i0 35.4 1.46007604562738 65 36 73 2 34 225 144 203 XP_067657806.1 uncharacterized protein [Haliotis asinina] diamond 384 43.5 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis asinina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;