RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA675638", tax_clade = "FCB group" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA675638 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30208021 30208021 PRJNA675638_P_NODE_2132_length_460_cov_1.613139_g1936_i0 PRJNA675638 2132 460 1.613139 7.4204394 Fidelibacterota bacterium 2026760 Bacteria Bacteria 214 1.65e-63   NR MBT6472528.1 2026760 g1936 i0 66.7 0.978260869565217 150 50 97.8 0 3 452 269 418 MBT6472528.1 ribonucleoside-diphosphate reductase subunit alpha [Fidelibacterota bacterium] diamond 450 214 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
31535897 31535897 PRJNA675638_P_NODE_3316_length_366_cov_1.447950_g3119_i0 PRJNA675638 3316 366 1.44795 5.299497 Fidelibacterota bacterium 2026760 Bacteria Bacteria 43.5 0.0293   NR PCH60136.1 2026760 g3119 i0 48.9 0.368852459016393 45 22 36.9 1 3 137 91 134 PCH60136.1 MAG: translation repressor protein [Fidelibacterota bacterium] diamond 135 43.5 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;