RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA675331" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA675331 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9576375 9576375 PRJNA675331_P_NODE_6588_length_377_cov_1.009868_g6416_i0 PRJNA675331 6588 377 1.009868 3.80720236 Perkinsus sp. BL_2 28001 SAR_Eukaryotes SAR_Eukaryotes 214 1.3599999999999999e-67   NR TEB14745.1 2494336 g6416 i0 78.7 6.06366047745358 127 25 99.5 1 1 375 94 220 TEB14745.1 ribosomal protein L2 [Perkinsus sp. BL_2016] diamond 2286 214 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus sp. BL_2016
10851804 10851804 PRJNA675331_P_NODE_3909_length_476_cov_1.910670_g3737_i0 PRJNA675331 3909 476 1.91067 9.0947892 Bigyra 2683628 SAR_Eukaryotes SAR_Eukaryotes 251 7.5e-79   NR KAF4694716.1 32597 g3737 i0 75.6 5.90546218487395 156 38 98.3 0 474 7 30 185 KAF4694716.1 hypothetical protein FOZ60_007229 [Perkinsus olseni] diamond 2811 251 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
27599445 27599445 PRJNA675331_P_NODE_21724_length_245_cov_0.895349_g21552_i0 PRJNA675331 21724 245 0.895349 2.19360505 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 91.7 2.32e-19   NR XP_002773666.1 423536 g21552 i0 46.9 10.0285714285714 81 43 99.2 0 244 2 214 294 XP_002773666.1 DNA helicase, putative [Perkinsus marinus ATCC 50983] diamond 2457 92 0.996739130434783 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;