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contig_metadata

23 rows where bioproject = "PRJNA675331", tax_phylum = "Myxococcota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 23 ✖

tax_phylum 1

  • Myxococcota · 23 ✖

tax_kingdom 1

bioproject 1

  • PRJNA675331 · 23 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
647638 647638 PRJNA675331_P_NODE_14341_length_275_cov_1.094059_g14169_i0 PRJNA675331 14341 275 1.094059 3.00866225 Myxococcales bacterium 2026763 Bacteria Bacteria 115 2.82e-29   NR MBL9044146.1 2026763 g14169 i0 60.2 0.96 88 35 96 0 6 269 122 209 MBL9044146.1 DUF1295 domain-containing protein [Myxococcales bacterium] diamond 264 115 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
5751294 5751294 PRJNA675331_P_NODE_14985_length_271_cov_1.555556_g14813_i0 PRJNA675331 14985 271 1.555556 4.21555676 Anaeromyxobacter paludicola 2918171 Bacteria Bacteria 189 1.8199999999999998e-43   NTclustered gi|2199271117|dbj|AP025592.1| 2918171 g14813 i0 88.199 99.7232472324723 161 15 59 4 30 188 1383715 1383557 Anaeromyxobacter paludicola DNA, complete genome blastn 27025 189 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Anaeromyxobacteraceae Anaeromyxobacter Anaeromyxobacter paludicola
26797105 26797105 PRJNA675331_P_NODE_18181_length_251_cov_0.865169_g18009_i0 PRJNA675331 18181 251 0.865169 2.17157419 Myxococcales bacterium 2026763 Bacteria Bacteria 94 3.86e-20   NR MDH5494061.1 2026763 g18009 i0 59 1.97211155378486 83 32 99.2 2 3 251 523 603 MDH5494061.1 glutamate synthase-related protein [Myxococcales bacterium] diamond 495 94 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
27113351 27113351 PRJNA675331_P_NODE_23682_length_242_cov_0.905325_g23510_i0 PRJNA675331 23682 242 0.905325 2.1908865 Polyangia bacterium 3058050 Bacteria Bacteria 42.4 0.0411   NR HVX94310.1 3058050 g23510 i0 30.8 0.805785123966942 65 44 80.6 1 237 43 109 172 HVX94310.1 response regulator [Polyangia bacterium] diamond 195 42.4 1 Bacteria   Pseudomonadati Myxococcota         Polyangia bacterium
27492775 27492775 PRJNA675331_P_NODE_17943_length_251_cov_1.466292_g17771_i0 PRJNA675331 17943 251 1.466292 3.68039292 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 57 4.93e-8   NR MDF1564045.1 2026735 g17771 i0 47.5 1.45816733067729 61 32 72.9 0 37 219 45 105 MDF1564045.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 366 57 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
27630979 27630979 PRJNA675331_P_NODE_22324_length_244_cov_0.900585_g22152_i0 PRJNA675331 22324 244 0.900585 2.1974274 Pseudomonadati 3379134 Bacteria Bacteria 55.5 1.22e-6   NR MFT3699646.1 2212474 g22152 i0 38.6 2.48360655737705 70 37 86.1 2 210 1 42 105 MFT3699646.1 right-handed parallel beta-helix repeat-containing protein [Kofleriaceae bacterium] diamond 606 55.8 0.99462365591397806 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium
27871554 27871554 PRJNA675331_P_NODE_4525_length_446_cov_2.252011_g4353_i0 PRJNA675331 4525 446 2.252011 10.04396906 Myxococcales bacterium 2026763 Bacteria Bacteria 46.2 0.0188   NR MBV70717.1 2026763 g4353 i0 34.1 0.571748878923767 85 53 55.8 2 40 288 504 587 MBV70717.1 hypothetical protein [Myxococcales bacterium] diamond 255 46.2 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
28155945 28155945 PRJNA675331_P_NODE_11365_length_299_cov_1.022124_g11193_i0 PRJNA675331 11365 299 1.022124 3.05615076 Myxococcales bacterium 2026763 Bacteria Bacteria 58.2 2.79e-7   NR USN51927.1 2026763 g11193 i0 53.1 1.06354515050167 49 22 48.2 1 129 272 106 154 USN51927.1 MAG: thrombospondin type 3 repeat-containing protein [Myxococcales bacterium] diamond 318 58.2 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
28881883 28881883 PRJNA675331_P_NODE_18848_length_250_cov_0.870056_g18676_i0 PRJNA675331 18848 250 0.870056 2.17514 Myxococcales bacterium 2026763 Bacteria Bacteria 99 1.7000000000000002e-22   NR MBL9099532.1 2026763 g18676 i0 57.8 2.988 83 35 99.6 0 1 249 148 230 MBL9099532.1 bis-aminopropyl spermidine synthase family protein [Myxococcales bacterium] diamond 747 99 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
28976831 28976831 PRJNA675331_P_NODE_8488_length_337_cov_0.875000_g8316_i0 PRJNA675331 8488 337 0.875 2.94875 Sorangium sp. 2093377 Bacteria Bacteria 50.4 2.01e-4   NR HTN92679.1 2093377 g8316 i0 61.5 5.63501483679525 39 14 34.7 1 2 118 199 236 HTN92679.1 calcium-binding EGF-like domain-containing protein [Sorangium sp.] diamond 1899 50.4 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Sorangium Sorangium sp.
29481570 29481570 PRJNA675331_P_NODE_11550_length_297_cov_1.031250_g11378_i0 PRJNA675331 11550 297 1.03125 3.0628125 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 45.4 0.00475   NR MEI8258264.1 2026735 g11378 i0 35 0.606060606060606 60 36 60.6 1 60 239 130 186 MEI8258264.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 180 45.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
29607798 29607798 PRJNA675331_P_NODE_16350_length_262_cov_1.629630_g16178_i0 PRJNA675331 16350 262 1.62963 4.2696306 Polyangiaceae bacterium 2268199 Bacteria Bacteria 85.9 3.21e-17   NR HVW25011.1 2268199 g16178 i0 48.8 0.961832061068702 84 42 95 1 253 5 115 198 HVW25011.1 EGF domain-containing protein [Polyangiaceae bacterium] diamond 252 85.9 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
29734174 29734174 PRJNA675331_P_NODE_18910_length_250_cov_0.870056_g18738_i0 PRJNA675331 18910 250 0.870056 2.17514 Polyangia bacterium 3058050 Bacteria Bacteria 51.2 4.13e-5   NR HEX3696334.1 3058050 g18738 i0 54.3 0.552 46 18 55.2 1 218 81 120 162 HEX3696334.1 calcium-binding EGF-like domain-containing protein [Polyangia bacterium] diamond 138 51.2 1 Bacteria   Pseudomonadati Myxococcota         Polyangia bacterium
29904285 29904285 PRJNA675331_P_NODE_19691_length_248_cov_1.314286_g19519_i0 PRJNA675331 19691 248 1.314286 3.25942928 Pseudomonadati 3379134 Bacteria Bacteria 53.1 8.73e-6   NR TFH25223.1 2026763 g19519 i0 35.8 5.21370967741935 81 43 87.1 2 217 2 454 534 TFH25223.1 MAG: hypothetical protein E4H03_01420 [Myxococcales bacterium] diamond 1293 53.5 0.992523364485981 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
29924078 29924078 PRJNA675331_P_NODE_2591_length_577_cov_0.916667_g2424_i0 PRJNA675331 2591 577 0.916667 5.28916859 Polyangiales bacterium 3034171 Bacteria Bacteria 202 4.28e-58   NR MFO0692508.1 3034171 g2424 i0 51.1 0.987868284228769 190 90 98.3 2 569 3 2 189 MFO0692508.1 long-chain fatty acid--CoA ligase [Polyangiales bacterium] diamond 570 202 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales     Polyangiales bacterium
30081760 30081760 PRJNA675331_P_NODE_22492_length_243_cov_2.588235_g22320_i0 PRJNA675331 22492 243 2.588235 6.28941105 Myxococcota bacterium 2818507 Bacteria Bacteria 78.2 1.22e-14   NR MEC8023817.1 2818507 g22320 i0 49.4 0.975308641975309 79 38 97.5 2 242 6 576 652 MEC8023817.1 hypothetical protein [Myxococcota bacterium] diamond 237 78.2 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
30113428 30113428 PRJNA675331_P_NODE_12752_length_285_cov_2.122642_g12580_i0 PRJNA675331 12752 285 2.122642 6.0495297 Myxococcales bacterium 2026763 Bacteria Bacteria 43.5 0.0322   NR NUN15889.1 2026763 g12580 i0 36.7 0.631578947368421 60 36 63.2 2 245 66 160 217 NUN15889.1 hypothetical protein [Myxococcales bacterium] diamond 180 43.5 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
30461496 30461496 PRJNA675331_P_NODE_1713_length_694_cov_1.607085_g1552_i0 PRJNA675331 1713 694 1.607085 11.1531699 Myxococcales bacterium 2026763 Bacteria Bacteria 68.2 3.89e-9   NR MBK6461975.1 2026763 g1552 i0 37.1 0.501440922190202 116 55 49.7 4 652 308 655 753 MBK6461975.1 DUF11 domain-containing protein [Myxococcales bacterium] diamond 348 68.2 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
30682003 30682003 PRJNA675331_P_NODE_13753_length_277_cov_1.509804_g13581_i0 PRJNA675331 13753 277 1.509804 4.18215708 Myxococcales bacterium 2026763 Bacteria Bacteria 58.9 1.18e-7   NR MBM65906.1 2026763 g13581 i0 35.9 1.11552346570397 103 43 89.9 4 261 13 739 838 MBM65906.1 hypothetical protein [Myxococcales bacterium] diamond 309 58.9 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
30840226 30840226 PRJNA675331_P_NODE_21654_length_245_cov_0.895349_g21482_i0 PRJNA675331 21654 245 0.895349 2.19360505 Kofleriaceae bacterium 2212474 Bacteria Bacteria 43.5 0.0206   NR NVB84741.1 2212474 g21482 i0 34.1 1.00408163265306 82 34 94.3 2 8 238 28 94 NVB84741.1 hypothetical protein [Kofleriaceae bacterium] diamond 246 43.5 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium
31504204 31504204 PRJNA675331_P_NODE_21796_length_245_cov_0.895349_g21624_i0 PRJNA675331 21796 245 0.895349 2.19360505 Myxococcales bacterium 2026763 Bacteria Bacteria 70.9 4.85e-12   NR MCB9523155.1 2026763 g21624 i0 56.8 3.55102040816327 74 30 90.6 1 224 3 781 852 MCB9523155.1 fasciclin domain-containing protein [Myxococcales bacterium] diamond 870 70.9 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
31662001 31662001 PRJNA675331_P_NODE_8657_length_334_cov_1.160920_g8485_i0 PRJNA675331 8657 334 1.16092 3.8774728 Myxococcota bacterium 2818507 Bacteria Bacteria 44.3 0.0324   NR MBP7125772.1 2818507 g8485 i0 63.3 0.269461077844311 30 10 26 1 324 238 115 144 MBP7125772.1 hypothetical protein [Myxococcota bacterium] diamond 90 44.3 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
32654074 32654074 PRJNA675331_P_NODE_3160_length_525_cov_1.190265_g2991_i0 PRJNA675331 3160 525 1.190265 6.24889125 root 1 Root_unresolved Root_unresolved 89.4 3.89e-17   NR WP_169927485.1 1391654 g2991 i0 41.5 2.01142857142857 118 64 65.7 5 525 181 255 370 WP_169927485.1 MYXO-CTERM sorting domain-containing protein [Labilithrix luteola] diamond 1056 89.4 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix luteola

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;