contig_metadata
4 rows where bioproject = "PRJNA675331" and tax_kingdom = "Methanobacteriati"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26765448 | 26765448 | PRJNA675331_P_NODE_24101_length_241_cov_0.916667_g23929_i0 | PRJNA675331 | 24101 | 241 | 0.916667 | 2.20916747 | Thermoplasmatota archaeon | 2806419 | Archaea | Archaea | 43.5 | 0.0172 | NR | MDG6225782.1 | 2806419 | g23929 | i0 | 34.5 | 0.684647302904564 | 55 | 36 | 68.5 | 0 | 56 | 220 | 180 | 234 | MDG6225782.1 metalloprotease family protein [Thermoplasmatota archaeon] | diamond | 165 | 43.5 | 1 | Archaea | Methanobacteriati | Thermoplasmatota | Thermoplasmatota archaeon | ||||||
| 26923794 | 26923794 | PRJNA675331_P_NODE_9922_length_316_cov_0.946502_g9750_i0 | PRJNA675331 | 9922 | 316 | 0.946502 | 2.99094632 | Geoglobus ahangari | 113653 | Archaea | Archaea | 86.7 | 1.42e-17 | NR | WP_048095167.1 | 113653 | g9750 | i0 | 42.9 | 0.996835443037975 | 105 | 57 | 99.7 | 2 | 315 | 1 | 45 | 146 | WP_048095167.1 bis-aminopropyl spermidine synthase family protein [Geoglobus ahangari] | diamond | 315 | 86.7 | 1 | Archaea | Methanobacteriati | Methanobacteriota | Archaeoglobi | Archaeoglobales | Archaeoglobaceae | Geoglobus | Geoglobus ahangari | ||
| 31535881 | 31535881 | PRJNA675331_P_NODE_12896_length_284_cov_1.459716_g12724_i0 | PRJNA675331 | 12896 | 284 | 1.459716 | 4.14559344 | Methanomicrobiales archaeon HGW-Methanomicrobiales-4 | 2013820 | Archaea | Archaea | 47.4 | 0.00104 | NR | PKL59616.1 | 2013820 | g12724 | i0 | 39.7 | 0.71830985915493 | 68 | 34 | 70.8 | 2 | 1 | 201 | 159 | 220 | PKL59616.1 MAG: hypothetical protein CVV33_06900, partial [Methanomicrobiales archaeon HGW-Methanomicrobiales-4] | diamond | 204 | 47.4 | 1 | Archaea | Stenosarchaea group | Methanobacteriati | Methanobacteriota | Methanomicrobia | Methanomicrobiales | Methanomicrobiales archaeon HGW-Methanomicrobiales-4 | |||
| 32705448 | 32705448 | PRJNA675331_P_NODE_7780_length_350_cov_0.866426_g7608_i0 | PRJNA675331 | 7780 | 350 | 0.866426 | 3.032491 | uncultured Methanospirillum sp. | 262503 | Archaea | Archaea | 89 | 2.15e-19 | NR | WP_319578547.1 | 262503 | g7608 | i0 | 44.5 | 3.63428571428571 | 110 | 60 | 94.3 | 1 | 21 | 350 | 15 | 123 | WP_319578547.1 ferritin [uncultured Methanospirillum sp.] | diamond | 1272 | 89 | 1 | Archaea | Stenosarchaea group | Methanobacteriati | Methanobacteriota | Methanomicrobia | Methanomicrobiales | Methanospirillaceae | Methanospirillum | uncultured Methanospirillum sp. |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;