RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA675331", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA675331 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24873923 24873923 PRJNA675331_P_NODE_5220_length_419_cov_1.112717_g5048_i0 PRJNA675331 5220 419 1.112717 4.66228423 Allomyces arbusculus 64504 Fungi Fungi 206 2.88e-64   NR KAJ3366916.1 64504 g5048 i0 75.5 0.995226730310263 139 34 99.5 0 418 2 52 190 KAJ3366916.1 40S ribosomal protein S6 [Allomyces arbusculus] diamond 417 206 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces arbusculus
30871767 30871767 PRJNA675331_P_NODE_8654_length_334_cov_1.176245_g8482_i0 PRJNA675331 8654 334 1.176245 3.9286583 Blastocladiella britannica 64508 Fungi Fungi 122 4.82e-30   NR KAI9222822.1 64508 g8482 i0 58.6 1.9940119760479 111 46 99.7 0 333 1 235 345 KAI9222822.1 dihydrolipoamide dehydrogenase [Blastocladiella britannica] diamond 666 122 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica
31579240 31579240 PRJNA675331_P_NODE_22916_length_243_cov_0.905882_g22744_i0 PRJNA675331 22916 243 0.905882 2.20129326 Fungi 4751 Fungi Fungi 91.3 6.47e-21   NR KAJ3359322.1 64505 g22744 i0 55.3 5.62962962962963 76 34 93.8 0 239 12 48 123 KAJ3359322.1 60S ribosomal protein L24 [Allomyces javanicus] diamond 1368 91.7 0.995637949836423 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces javanicus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;