RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA675042" and tax_phylum = "Hemichordata"

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tax_superkingdom 1

tax_phylum 1

  • Hemichordata · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA675042 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13400652 13400652 PRJNA675042_P_NODE_178491_length_241_cov_0.916667_g178041_i0 PRJNA675042 178491 241 0.916667 2.20916747 Saccoglossus kowalevskii 10224 Hemichordata other_Eukaryota 54.7 0.006   NTclustered gi|585656622|ref|XM_006815641.1| 10224 g178041 i0 100 0.120331950207469 29 0 12 0 188 216 917 945 PREDICTED: Saccoglossus kowalevskii DNA (cytosine-5)-methyltransferase 3A-like (LOC102808789), partial mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Harrimaniidae Saccoglossus Saccoglossus kowalevskii
22845507 22845507 PRJNA675042_P_NODE_19158_length_417_cov_1.200581_g18708_i0 PRJNA675042 19158 417 1.200581 5.00642277 Metazoa 33208 Hemichordata other_Eukaryota 58.4 8.62e-4   NTclustered gi|2875712063|ref|XM_070686658.1| 63121 g18708 i0 88.462 6.53717026378897 52 1 12 5 205 253 3793 3842 PREDICTED: Ptychodera flava uncharacterized protein (LOC139121614), mRNA blastn 2726 58.4 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Ptychoderidae Ptychodera Ptychodera flava

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;