RNAquarium Metadata Server
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contig_metadata

11 rows where bioproject = "PRJNA675042" and tax_kingdom = "Pararnavirae"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Pararnavirae · 11 ✖

bioproject 1

  • PRJNA675042 · 11 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2443419 2443419 PRJNA675042_P_NODE_262_length_2325_cov_2.270426_g90_i1 PRJNA675042 262 2325 2.270426 52.7874045 root 1 Root_unresolved Root_unresolved 2784 0   NTclustered gi|57547625|tpd|BR000031.1| 10654 g90 i1 88.119 99.5152688172043 2323 276 99 0 1 2323 5362 3040 TPA_inf: Rice tungro bacilliform virus orf x, orf y and orf z genes for hypothetical proteins, isolate:ERTBV-C blastn 231373 2802 0.993576017130621 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae Tungrovirus Tungrovirus oryzae
3719768 3719768 PRJNA675042_P_NODE_21403_length_406_cov_0.969970_g20953_i0 PRJNA675042 21403 406 0.96997 3.9380782 root 1 Root_unresolved Root_unresolved 414 4.3099999999999996e-111   NTclustered gi|57547617|tpd|BR000029.1| 10654 g20953 i0 84.938 16.935960591133 405 61 99 0 2 406 6968 6564 TPA_inf: Rice tungro bacilliform virus orf x, orf y and orf z genes for hypothetical proteins, isolate:ERTBV-A blastn 6876 416 0.995192307692308 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae Tungrovirus Tungrovirus oryzae
3719884 3719884 PRJNA675042_P_NODE_38263_length_348_cov_1.036364_g37813_i0 PRJNA675042 38263 348 1.036364 3.60654672 root 1 Root_unresolved Root_unresolved 248 3.92e-61   NTclustered gi|57547617|tpd|BR000029.1| 10654 g37813 i0 86.404 17.75 228 30 66 1 121 348 7000 7226 TPA_inf: Rice tungro bacilliform virus orf x, orf y and orf z genes for hypothetical proteins, isolate:ERTBV-A blastn 6177 248 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae Tungrovirus Tungrovirus oryzae
4996400 4996400 PRJNA675042_P_NODE_1864_length_977_cov_1.922566_g1532_i0 PRJNA675042 1864 977 1.922566 18.78346982 root 1 Root_unresolved Root_unresolved 1288 0   NTclustered gi|57547617|tpd|BR000029.1| 10654 g1532 i0 90.349 80.4493346980553 974 94 99 0 4 977 2261 1288 TPA_inf: Rice tungro bacilliform virus orf x, orf y and orf z genes for hypothetical proteins, isolate:ERTBV-A blastn 78599 1290 0.998449612403101 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae Tungrovirus Tungrovirus oryzae
8820780 8820780 PRJNA675042_P_NODE_113067_length_250_cov_0.870056_g112617_i0 PRJNA675042 113067 250 0.870056 2.17514 root 1 Root_unresolved Root_unresolved 182 2.769999999999999e-41   NTclustered gi|57547617|tpd|BR000029.1| 10654 g112617 i0 94.118 39.14 119 7 48 0 1 119 945 1063 TPA_inf: Rice tungro bacilliform virus orf x, orf y and orf z genes for hypothetical proteins, isolate:ERTBV-A blastn 9785 182 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae Tungrovirus Tungrovirus oryzae
8821213 8821213 PRJNA675042_P_NODE_3787_length_701_cov_1.832803_g3377_i0 PRJNA675042 3787 701 1.832803 12.84794903 root 1 Root_unresolved Root_unresolved 1020 0   NTclustered gi|57547625|tpd|BR000031.1| 10654 g3377 i0 92.725 59.2154065620542 701 51 100 0 1 701 3106 2406 TPA_inf: Rice tungro bacilliform virus orf x, orf y and orf z genes for hypothetical proteins, isolate:ERTBV-C blastn 41510 1024 0.99609375 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae Tungrovirus Tungrovirus oryzae
11371999 11371999 PRJNA675042_P_NODE_869_length_1386_cov_1.570449_g638_i0 PRJNA675042 869 1386 1.570449 21.76642314 root 1 Root_unresolved Root_unresolved 1888 0   NTclustered gi|57547621|tpd|BR000030.1| 10654 g638 i0 91.226 63.3694083694084 1379 121 99 0 1 1379 2427 1049 TPA_inf: Rice tungro bacilliform virus orf x, orf y and orf z genes for hypothetical proteins, isolate:ERTBV-B blastn 87830 1890 0.998941798941799 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae Tungrovirus Tungrovirus oryzae
13922371 13922371 PRJNA675042_P_NODE_89451_length_270_cov_0.913706_g89001_i0 PRJNA675042 89451 270 0.913706 2.4670062 root 1 Root_unresolved Root_unresolved 285 2.24e-72   NTclustered gi|57547617|tpd|BR000029.1| 10654 g89001 i0 85.556 17.1851851851852 270 39 100 0 1 270 5189 4920 TPA_inf: Rice tungro bacilliform virus orf x, orf y and orf z genes for hypothetical proteins, isolate:ERTBV-A blastn 4640 285 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae Tungrovirus Tungrovirus oryzae
19020170 19020170 PRJNA675042_P_NODE_875_length_1382_cov_1.644767_g644_i0 PRJNA675042 875 1382 1.644767 22.73067994 root 1 Root_unresolved Root_unresolved 1271 0   NTclustered gi|57547621|tpd|BR000030.1| 10654 g644 i0 84.515 55.5463096960926 1298 186 93 10 80 1368 5836 7127 TPA_inf: Rice tungro bacilliform virus orf x, orf y and orf z genes for hypothetical proteins, isolate:ERTBV-B blastn 76765 1275 0.996862745098039 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae Tungrovirus Tungrovirus oryzae
21570651 21570651 PRJNA675042_P_NODE_90957_length_268_cov_1.164103_g90507_i0 PRJNA675042 90957 268 1.164103 3.11979604 root 1 Root_unresolved Root_unresolved 361 3.59e-95   NTclustered gi|57547617|tpd|BR000029.1| 10654 g90507 i0 91.571 93.8619402985075 261 22 97 0 4 264 4175 3915 TPA_inf: Rice tungro bacilliform virus orf x, orf y and orf z genes for hypothetical proteins, isolate:ERTBV-A blastn 25155 361 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae Tungrovirus Tungrovirus oryzae
29272431 29272431 PRJNA675042_P_NODE_30749_length_370_cov_1.191919_g30299_i0 PRJNA675042 30749 370 1.191919 4.4101003 root 1 Root_unresolved Root_unresolved 89 1.56e-18   NR FAA00013.1 10654 g30299 i0 53.6 1.78378378378378 110 51 89.2 0 364 35 164 273 FAA00013.1 TPA: hypothetical protein [Rice tungro bacilliform virus] diamond 660 89.7 0.992196209587514 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae Tungrovirus Tungrovirus oryzae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;