RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA675042", tax_kingdom = "Orthornavirae" and tax_phylum = "Duplornaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Duplornaviricota · 2 ✖

tax_kingdom 1

  • Orthornavirae · 2 ✖

bioproject 1

  • PRJNA675042 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18499107 18499107 PRJNA675042_P_NODE_30415_length_371_cov_1.550336_g29965_i0 PRJNA675042 30415 371 1.550336 5.75174656 Agaricus bisporus virus 1 46339 Viruses Viruses 455 2.3e-123   NTclustered gi|221975|dbj|D10830.1|LFDPL3 28373 g29965 i0 96.377 3 276 10 100 0 1 276 377 652 La France disease virus pL3 gene, complete cds blastn 1113 455 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Chrysoviridae Chrysovirus Agaricus bisporus virus 1
24873116 24873116 PRJNA675042_P_NODE_40180_length_343_cov_1.707407_g39730_i0 PRJNA675042 40180 343 1.707407 5.85640601 Chemarfal virus 258 3063149 Viruses Viruses 508 1.6e-139   NTclustered gi|2626079799|gb|OR270470.1| 3063149 g39730 i0 94.03 1.9533527696793 335 20 98 0 1 335 58 392 MAG: Chemarfal virus 258 isolate ML188 genomic sequence blastn 670 508 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales     Chemarfal virus 258

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;