RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA675042", tax_kingdom = "Fungi" and tax_phylum = "Mucoromycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA675042 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1923284 1923284 PRJNA675042_P_NODE_58342_length_310_cov_2.755274_g57892_i0 PRJNA675042 58342 310 2.755274 8.5413494 Cokeromyces recurvatus 90255 Fungi Fungi 564 3.0099999999999996e-156   NTclustered gi|49066442|gb|AY635843.1| 90255 g57892 i0 99.675 99.2 308 1 99 0 3 310 1126 819 Cokeromyces recurvatus isolate AFTOL-ID 627 18S ribosomal RNA gene, partial sequence blastn 30752 564 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Cokeromyces Cokeromyces recurvatus
27429770 27429770 PRJNA675042_P_NODE_26323_length_385_cov_1.714744_g25873_i0 PRJNA675042 26323 385 1.714744 6.6017644 Racocetra persica 160502 Fungi Fungi 47.4 0.0041   NR CAG8723677.1 160502 g25873 i0 44.4 0.490909090909091 63 35 49.1 0 4 192 378 440 CAG8723677.1 17464_t:CDS:2, partial [Racocetra persica] diamond 189 47.4 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Racocetra Racocetra persica
30966730 30966730 PRJNA675042_P_NODE_48034_length_328_cov_0.850980_g47584_i0 PRJNA675042 48034 328 0.85098 2.7912144 Podila humilis 64523 Fungi Fungi 54.3 7.36e-7   NR KAI9236711.1 64523 g47584 i0 62.8 0.393292682926829 43 16 39.3 0 213 85 48 90 KAI9236711.1 MAG: hypothetical protein BYD32DRAFT_369445, partial [Podila humilis] diamond 129 54.3 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Podila Podila humilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;