RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA674308", tax_phylum = "Thermoproteota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Thermoproteota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA674308 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29809287 29809287 PRJNA674308_P_NODE_5551_length_403_cov_1.728814_g5316_i0 PRJNA674308 5551 403 1.728814 6.96712042 Archaea 2157 Archaea Archaea 50.1 5.57e-5   NR MCD6492090.1 2056631 g5316 i0 45.6 0.84863523573201 57 29 42.4 1 400 230 26 80 MCD6492090.1 tetratricopeptide repeat protein [Thermoproteota archaeon] diamond 342 50.1 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon
31187282 31187282 PRJNA674308_P_NODE_10155_length_299_cov_1.716000_g9920_i0 PRJNA674308 10155 299 1.716 5.13084 Thermoproteota archaeon 2056631 Archaea Archaea 42.4 0.0405   NR RLG48071.1 2056631 g9920 i0 35.1 0.57190635451505 57 34 57.2 1 199 29 41 94 RLG48071.1 MAG: rhomboid family intramembrane serine protease, partial [Thermoproteota archaeon] diamond 171 42.4 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;