RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA674308", tax_phylum = "Cressdnaviricota" and tax_superkingdom = "Viruses"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

  • Cressdnaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA674308 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24118376 24118376 PRJNA674308_P_NODE_15619_length_245_cov_1.387755_g15384_i0 PRJNA674308 15619 245 1.387755 3.39999975 Galvornvirus 2948715 Viruses Viruses 453 5.1900000000000006e-123   NTclustered gi|2626080284|gb|OR270688.1| 1954248 g15384 i0 100 6.21632653061225 245 0 100 0 1 245 1809 2053 MAG: Circoviridae sp. isolate GL83, complete genome blastn 1523 453 1 Viruses   Shotokuvirae Cressdnaviricota Arfiviricetes Rohanvirales Nenyaviridae Galvornvirus Galvornvirus isengard
29071482 29071482 PRJNA674308_P_NODE_44048_length_166_cov_0.888889_g43813_i0 PRJNA674308 44048 166 0.888889 1.47555574 Circovirus sp. 1964372 Viruses Viruses 45.4 7.96e-4   NR WQA29654.1 1964372 g43813 i0 35.2 1.95180722891566 54 35 97.6 0 164 3 90 143 WQA29654.1 MAG: rep protein, partial [Circovirus sp.] diamond 324 45.4 1 Viruses   Shotokuvirae Cressdnaviricota Arfiviricetes Cirlivirales Circoviridae Circovirus Circovirus sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;