contig_metadata
10 rows where bioproject = "PRJNA674308", tax_kingdom = "Pseudomonadati" and tax_phylum = "Thermodesulfobacteriota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4994859 | 4994859 | PRJNA674308_P_NODE_29804_length_185_cov_1.147059_g29569_i0 | PRJNA674308 | 29804 | 185 | 1.147059 | 2.12205915 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 224 | 3.16e-54 | NTclustered | gi|2893358420|emb|OZ220712.1| | 2202153 | g29569 | i0 | 88.649 | 131.935135135135 | 185 | 20 | 99 | 1 | 2 | 185 | 1712793 | 1712609 | MAG: Thermodesulfobacteriota bacterium isolate 564989d4-0a31-48dd-8468-51938819ad86 genome assembly, chromosome: 1 | blastn | 24408 | 224 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Thermodesulfobacteriota bacterium | ||||||
| 8297900 | 8297900 | PRJNA674308_P_NODE_11447_length_282_cov_1.918455_g11212_i0 | PRJNA674308 | 11447 | 282 | 1.918455 | 5.4100431 | Desulfarculia bacterium | 3065862 | Bacteria | Bacteria | 291 | 5.06e-74 | NTclustered | gi|2621702698|emb|OY759590.1| | 3065862 | g11212 | i0 | 86.517 | 149.219858156028 | 267 | 33 | 95 | 3 | 16 | 282 | 335716 | 335453 | MAG: Desulfarculia bacterium isolate 49400898-fc5b-42b7-bef8-a303f8702bb8 genome assembly, chromosome: 1 | blastn | 42080 | 291 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfarculia | Desulfarculia bacterium | |||||
| 26923641 | 26923641 | PRJNA674308_P_NODE_15982_length_242_cov_2.284974_g15747_i0 | PRJNA674308 | 15982 | 242 | 2.284974 | 5.52963708 | Geotalea uraniireducens | 351604 | Bacteria | Bacteria | 42.7 | 0.0357 | NR | WP_348835281.1 | 351604 | g15747 | i0 | 41.7 | 0.743801652892562 | 60 | 33 | 74.4 | 1 | 27 | 206 | 313 | 370 | WP_348835281.1 30S ribosomal protein S1 [Geotalea uraniireducens] | diamond | 180 | 42.7 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geotalea | Geotalea uraniireducens | ||
| 27124938 | 27124938 | PRJNA674308_P_NODE_48222_length_164_cov_0.904348_g47987_i0 | PRJNA674308 | 48222 | 164 | 0.904348 | 1.48313072 | Bacteria | 2 | Bacteria | Bacteria | 54.3 | 1.06e-6 | NR | PIP40895.1 | 1973983 | g47987 | i0 | 54.7 | 3.89634146341463 | 53 | 24 | 97 | 0 | 5 | 163 | 656 | 708 | PIP40895.1 MAG: hypothetical protein COX19_04720, partial [Desulfobacterales bacterium CG23_combo_of_CG06-09_8_20_14_all_51_8] | diamond | 639 | 54.7 | 0.992687385740402 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacterales bacterium CG23_combo_of_CG06-09_8_20_14_all_51_8 | ||||
| 27207994 | 27207994 | PRJNA674308_P_NODE_30182_length_184_cov_1.155556_g29947_i0 | PRJNA674308 | 30182 | 184 | 1.155556 | 2.12622304 | Candidatus Magnetomorum sp. HK-1 | 1509431 | Bacteria | Bacteria | 77 | 1.41e-14 | NR | KPA11669.1 | 1509431 | g29947 | i0 | 60 | 1.95652173913043 | 60 | 21 | 97.8 | 1 | 180 | 1 | 423 | 479 | KPA11669.1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Candidatus Magnetomorum sp. HK-1] | diamond | 360 | 77 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Candidatus Magnetomoraceae | Candidatus Magnetomorum | Candidatus Magnetomorum sp. HK-1 | ||
| 27334816 | 27334816 | PRJNA674308_P_NODE_46183_length_165_cov_0.896552_g45948_i0 | PRJNA674308 | 46183 | 165 | 0.896552 | 1.4793108 | Desulfobacterales bacterium RIFOXYA12_FULL_46_15 | 1797914 | Bacteria | Bacteria | 54.3 | 9.69e-7 | NR | OGR25613.1 | 1797914 | g45948 | i0 | 58.5 | 0.963636363636364 | 53 | 20 | 96.4 | 2 | 6 | 164 | 48 | 98 | OGR25613.1 MAG: short-chain dehydrogenase [Desulfobacterales bacterium RIFOXYA12_FULL_46_15] | diamond | 159 | 54.3 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacterales bacterium RIFOXYA12_FULL_46_15 | ||||
| 28167639 | 28167639 | PRJNA674308_P_NODE_32685_length_177_cov_1.531250_g32450_i0 | PRJNA674308 | 32685 | 177 | 1.53125 | 2.7103125 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 55.5 | 3.69e-7 | NR | MBC2694805.1 | 2049433 | g32450 | i0 | 47.3 | 3.6271186440678 | 55 | 28 | 91.5 | 1 | 168 | 7 | 25 | 79 | MBC2694805.1 5'-methylthioadenosine nucleosidase [Desulfobacteraceae bacterium] | diamond | 642 | 55.5 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacteraceae | Desulfobacteraceae bacterium | |||
| 28945262 | 28945262 | PRJNA674308_P_NODE_42828_length_166_cov_0.888889_g42593_i0 | PRJNA674308 | 42828 | 166 | 0.888889 | 1.47555574 | Candidatus Dadabacteria bacterium | 2080303 | Bacteria | Bacteria | 116 | 6.57e-30 | NR | NIP31130.1 | 2080303 | g42593 | i0 | 94.4 | 5.85542168674699 | 54 | 3 | 97.6 | 0 | 3 | 164 | 146 | 199 | NIP31130.1 recombinase [Candidatus Dadabacteria bacterium] | diamond | 972 | 116 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Candidatus Dadabacteria | Candidatus Dadabacteria bacterium | |||||
| 30093492 | 30093492 | PRJNA674308_P_NODE_552_length_1311_cov_2.203645_g462_i0 | PRJNA674308 | 552 | 1311 | 2.203645 | 28.88978595 | root | 1 | Root_unresolved | Root_unresolved | 356 | 2.04e-114 | NR | WP_020589162.1 | 2290 | g462 | i0 | 47 | 24.8810068649886 | 404 | 211 | 91.8 | 3 | 2 | 1204 | 127 | 530 | WP_020589162.1 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase [Desulfobacter curvatus] | diamond | 32619 | 358 | 0.994413407821229 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacteraceae | Desulfobacter | Desulfobacter curvatus | ||
| 31420917 | 31420917 | PRJNA674308_P_NODE_48436_length_164_cov_0.904348_g48201_i0 | PRJNA674308 | 48436 | 164 | 0.904348 | 1.48313072 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 48.1 | 1.61e-4 | NR | KPA13394.1 | 1509431 | g48201 | i0 | 62.9 | 4.99390243902439 | 35 | 13 | 64 | 0 | 106 | 2 | 2226 | 2260 | KPA13394.1 Concanavalin A-like lectin/glucanase [Candidatus Magnetomorum sp. HK-1] | diamond | 819 | 48.5 | 0.991752577319588 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Candidatus Magnetomoraceae | Candidatus Magnetomorum | Candidatus Magnetomorum sp. HK-1 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;