contig_metadata
15 rows where bioproject = "PRJNA674308", tax_kingdom = "Pseudomonadati" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1166440 | 1166440 | PRJNA674308_P_NODE_12541_length_271_cov_1.117117_g12306_i0 | PRJNA674308 | 12541 | 271 | 1.117117 | 3.02738707 | Bdellovibrio | 958 | Bacteria | Bacteria | 405 | 1.66e-108 | NTclustered | gi|2800920897|gb|CP168968.1| | 959 | g12306 | i0 | 98.268 | 74.0036900369004 | 231 | 4 | 85 | 0 | 1 | 231 | 779328 | 779558 | Bdellovibrio bacteriovorus strain Bd5 chromosome, complete genome | blastn | 20055 | 405 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 23597627 | 23597627 | PRJNA674308_P_NODE_36319_length_169_cov_0.866667_g36084_i0 | PRJNA674308 | 36319 | 169 | 0.866667 | 1.46466723 | Bdellovibrio sp. qaytius | 1916293 | Bacteria | Bacteria | 246 | 6.03e-61 | NTclustered | gi|1552089877|gb|CP025734.1| | 1916293 | g36084 | i0 | 92.899 | 161.869822485207 | 169 | 12 | 100 | 0 | 1 | 169 | 666301 | 666469 | Bdellovibrio sp. qaytius chromosome, complete genome | blastn | 27356 | 246 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. qaytius | ||
| 26669952 | 26669952 | PRJNA674308_P_NODE_1201_length_911_cov_13.966357_g1031_i0 | PRJNA674308 | 1201 | 911 | 13.966357 | 127.23351227 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 375 | 3.9499999999999996e-129 | NR | MBX9767865.1 | 2053517 | g1031 | i0 | 90.5 | 0.661909989023052 | 201 | 19 | 66.2 | 0 | 669 | 67 | 1 | 201 | MBX9767865.1 hypothetical protein [Bdellovibrionales bacterium] | diamond | 603 | 375 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 27429679 | 27429679 | PRJNA674308_P_NODE_2323_length_646_cov_2.281407_g2103_i0 | PRJNA674308 | 2323 | 646 | 2.281407 | 14.73788922 | Halobacteriovorax sp. | 2020862 | Bacteria | Bacteria | 47.4 | 0.00519 | NR | MBK25694.1 | 2020862 | g2103 | i0 | 33.3 | 0.404024767801858 | 87 | 57 | 40.4 | 1 | 331 | 71 | 2 | 87 | MBK25694.1 hypothetical protein [Halobacteriovorax sp.] | diamond | 261 | 47.4 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Halobacteriovoraceae | Halobacteriovorax | Halobacteriovorax sp. | ||
| 28029448 | 28029448 | PRJNA674308_P_NODE_19285_length_223_cov_1.712644_g19050_i0 | PRJNA674308 | 19285 | 223 | 1.712644 | 3.81919612 | Bacteriovoracaceae bacterium | 2081706 | Bacteria | Bacteria | 43.5 | 0.0154 | NR | MBT3983607.1 | 2081706 | g19050 | i0 | 34.3 | 0.901345291479821 | 67 | 40 | 84.8 | 2 | 6 | 194 | 1247 | 1313 | MBT3983607.1 hypothetical protein [Bacteriovoracaceae bacterium] | diamond | 201 | 43.5 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovoracaceae bacterium | |||
| 29197738 | 29197738 | PRJNA674308_P_NODE_38189_length_168_cov_0.873950_g37954_i0 | PRJNA674308 | 38189 | 168 | 0.87395 | 1.468236 | Bdellovibrio sp. | 28201 | Bacteria | Bacteria | 106 | 5.61e-25 | NR | NUN05725.1 | 28201 | g37954 | i0 | 94.5 | 0.982142857142857 | 55 | 3 | 98.2 | 0 | 167 | 3 | 106 | 160 | NUN05725.1 hypothetical protein [Bdellovibrio sp.] | diamond | 165 | 106 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. | ||
| 29260508 | 29260508 | PRJNA674308_P_NODE_21529_length_213_cov_1.585366_g21294_i0 | PRJNA674308 | 21529 | 213 | 1.585366 | 3.37682958 | Silvanigrellaceae bacterium | 2654442 | Bacteria | Bacteria | 102 | 5.33e-26 | NR | MBX9702949.1 | 2654442 | g21294 | i0 | 80.9 | 0.957746478873239 | 68 | 12 | 95.8 | 1 | 3 | 206 | 40 | 106 | MBX9702949.1 hypothetical protein [Silvanigrellaceae bacterium] | diamond | 204 | 102 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Silvanigrellales | Silvanigrellaceae | Silvanigrellaceae bacterium | |||
| 29967385 | 29967385 | PRJNA674308_P_NODE_32691_length_177_cov_1.500000_g32456_i0 | PRJNA674308 | 32691 | 177 | 1.5 | 2.655 | Bacteria | 2 | Bacteria | Bacteria | 60.1 | 4.96e-10 | NR | PWU12825.1 | 28201 | g32456 | i0 | 45.6 | 25.8983050847458 | 57 | 31 | 96.6 | 0 | 172 | 2 | 27 | 83 | PWU12825.1 MAG: 30S ribosomal protein S15 [Bdellovibrio sp.] | diamond | 4584 | 60.1 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. | ||
| 29987020 | 29987020 | PRJNA674308_P_NODE_29071_length_187_cov_1.507246_g28836_i0 | PRJNA674308 | 29071 | 187 | 1.507246 | 2.81855002 | Pseudobacteriovorax antillogorgiicola | 1513793 | Bacteria | Bacteria | 92.8 | 4.12e-20 | NR | WP_132322376.1 | 1513793 | g28836 | i0 | 71 | 5.96791443850267 | 62 | 17 | 99.5 | 1 | 187 | 2 | 247 | 307 | WP_132322376.1 NADPH-dependent 2,4-dienoyl-CoA reductase [Pseudobacteriovorax antillogorgiicola] | diamond | 1116 | 92.8 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Oligoflexales | Pseudobacteriovoracaceae | Pseudobacteriovorax | Pseudobacteriovorax antillogorgiicola | ||
| 30555544 | 30555544 | PRJNA674308_P_NODE_9373_length_311_cov_1.316794_g9138_i0 | PRJNA674308 | 9373 | 311 | 1.316794 | 4.09522934 | Silvanigrellaceae bacterium | 2654442 | Bacteria | Bacteria | 83.6 | 7.87e-19 | NR | MBX9703359.1 | 2654442 | g9138 | i0 | 62.7 | 0.491961414790997 | 51 | 19 | 49.2 | 0 | 253 | 101 | 1 | 51 | MBX9703359.1 hypothetical protein [Silvanigrellaceae bacterium] | diamond | 153 | 83.6 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Silvanigrellales | Silvanigrellaceae | Silvanigrellaceae bacterium | |||
| 30713646 | 30713646 | PRJNA674308_P_NODE_35794_length_169_cov_1.300000_g35559_i0 | PRJNA674308 | 35794 | 169 | 1.3 | 2.197 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 60.8 | 5.61e-9 | NR | MFN9065847.1 | 2053517 | g35559 | i0 | 51.9 | 1.91715976331361 | 54 | 26 | 95.9 | 0 | 168 | 7 | 37 | 90 | MFN9065847.1 PAS domain-containing protein [Bdellovibrionales bacterium] | diamond | 324 | 60.8 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 31883373 | 31883373 | PRJNA674308_P_NODE_31717_length_180_cov_1.091603_g31482_i0 | PRJNA674308 | 31717 | 180 | 1.091603 | 1.9648854 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 43.5 | 0.00839 | NR | MBY0415398.1 | 2053517 | g31482 | i0 | 42.4 | 1.88333333333333 | 59 | 34 | 98.3 | 0 | 2 | 178 | 217 | 275 | MBY0415398.1 MFS transporter [Bdellovibrionales bacterium] | diamond | 339 | 43.5 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 32326829 | 32326829 | PRJNA674308_P_NODE_18899_length_225_cov_1.602273_g18664_i0 | PRJNA674308 | 18899 | 225 | 1.602273 | 3.60511425 | Silvanigrellaceae bacterium | 2654442 | Bacteria | Bacteria | 131 | 8.92e-38 | NR | MBX9704131.1 | 2654442 | g18664 | i0 | 93.9 | 0.88 | 66 | 4 | 88 | 0 | 28 | 225 | 1 | 66 | MBX9704131.1 DUF4442 domain-containing protein [Silvanigrellaceae bacterium] | diamond | 198 | 131 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Silvanigrellales | Silvanigrellaceae | Silvanigrellaceae bacterium | |||
| 32642185 | 32642185 | PRJNA674308_P_NODE_35220_length_170_cov_2.090909_g34985_i0 | PRJNA674308 | 35220 | 170 | 2.090909 | 3.5545453 | Bdellovibrionia bacterium | 3034169 | Bacteria | Bacteria | 70.1 | 2.12e-13 | NR | MEO5970318.1 | 3034169 | g34985 | i0 | 67.9 | 1.95882352941176 | 56 | 17 | 97.1 | 1 | 1 | 165 | 67 | 122 | MEO5970318.1 hotdog fold thioesterase [Bdellovibrionia bacterium] | diamond | 333 | 70.1 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionia bacterium | |||||
| 32831405 | 32831405 | PRJNA674308_P_NODE_2360_length_640_cov_1.923858_g2138_i0 | PRJNA674308 | 2360 | 640 | 1.923858 | 12.3126912 | Bdellovibrionia bacterium | 3034169 | Bacteria | Bacteria | 192 | 1.7899999999999998e-56 | NR | MEO5969990.1 | 3034169 | g2138 | i0 | 53.6 | 4.5609375 | 181 | 74 | 80.2 | 2 | 513 | 1 | 1 | 181 | MEO5969990.1 NAD(P)H-quinone oxidoreductase [Bdellovibrionia bacterium] | diamond | 2919 | 192 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionia bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;