RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA674308", tax_kingdom = "Methanobacteriati" and tax_phylum = "Thermoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 2 ✖

tax_kingdom 1

  • Methanobacteriati · 2 ✖

bioproject 1

  • PRJNA674308 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26892140 26892140 PRJNA674308_P_NODE_11661_length_280_cov_1.770563_g11426_i0 PRJNA674308 11661 280 1.770563 4.9575764 Thermoplasmata archaeon 1906666 Archaea Archaea 51.6 4.6e-5   NR MEM3493765.1 1906666 g11426 i0 30.1 1.99285714285714 93 62 99.6 1 1 279 174 263 MEM3493765.1 S8 family serine peptidase [Thermoplasmata archaeon] diamond 558 51.6 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
28566051 28566051 PRJNA674308_P_NODE_37647_length_168_cov_2.621849_g37412_i0 PRJNA674308 37647 168 2.621849 4.40470632 Thermoplasmata archaeon 1906666 Archaea Archaea 82.4 1.38e-16   NR RLF33997.1 1906666 g37412 i0 68.5 1.94642857142857 54 17 96.4 0 6 167 198 251 RLF33997.1 MAG: pyruvate, phosphate dikinase, partial [Thermoplasmata archaeon] diamond 327 82.4 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;