RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA674308", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA674308 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10848760 10848760 PRJNA674308_P_NODE_27869_length_190_cov_2.666667_g27634_i0 PRJNA674308 27869 190 2.666667 5.0666673 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 112 4.2400000000000006e-27   NR MDX2064197.1 2682144 g27634 i0 79.4 3.97894736842105 63 13 99.5 0 2 190 76 138 MDX2064197.1 proline--tRNA ligase [Fimbriimonadaceae bacterium] diamond 756 112 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
26669969 26669969 PRJNA674308_P_NODE_28921_length_187_cov_2.637681_g28686_i0 PRJNA674308 28921 187 2.637681 4.93246347 Armatimonas sp. 1872638 Bacteria Bacteria 42 0.0337   NR WP_395094179.1 1872638 g28686 i0 45.5 0.529411764705882 33 18 52.9 0 127 29 50 82 WP_395094179.1 AAA family ATPase [Armatimonas sp.] diamond 99 42 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae Armatimonas Armatimonas sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;