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contig_metadata

32 rows where bioproject = "PRJNA674308", tax_clade = "Sar" and tax_phylum = "Ciliophora"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 32 ✖

tax_clade 1

  • Sar · 32 ✖

bioproject 1

  • PRJNA674308 · 32 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4472933 4472933 PRJNA674308_P_NODE_9164_length_315_cov_1.135338_g8929_i0 PRJNA674308 9164 315 1.135338 3.5763147 Ichthyophthirius multifiliis 5932 SAR_Eukaryotes SAR_Eukaryotes 61.2 2.82e-8   NR XP_004036894.1 5932 g8929 i0 53.8 1.31428571428571 65 29 61.9 1 100 294 53 116 XP_004036894.1 hypothetical protein IMG5_067050 [Ichthyophthirius multifiliis] diamond 414 61.2 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
7023276 7023276 PRJNA674308_P_NODE_16186_length_241_cov_1.369792_g15951_i0 PRJNA674308 16186 241 1.369792 3.30119872 Colpoda sp. 41631 SAR_Eukaryotes SAR_Eukaryotes 357 4.1099999999999997e-94   NTclustered gi|2651357788|gb|PP174303.1| 41631 g15951 i0 93.388 61.4273858921162 242 14 100 2 1 241 3397 3637 Colpoda sp. isolate CIL1 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 14804 357 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp.
7544328 7544328 PRJNA674308_P_NODE_1546_length_807_cov_7.915567_g1355_i0 PRJNA674308 1546 807 7.915567 63.87862569 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 1356 0   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g1355 i0 97.022 51.2552664188352 806 24 99 0 1 806 10 815 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 41363 1356 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
10848991 10848991 PRJNA674308_P_NODE_8269_length_331_cov_1.599291_g8034_i0 PRJNA674308 8269 331 1.599291 5.29365321 Paramecium caudatum 5885 SAR_Eukaryotes SAR_Eukaryotes 126 1.81e-24   NTclustered gi|299830252|ref|NC_014262.1| 5885 g8034 i0 76.357 4.18126888217523 258 48 75 9 1 247 1235 1490 Paramecium caudatum mitochondrion, complete genome blastn 1384 126 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium caudatum
11369987 11369987 PRJNA674308_P_NODE_14329_length_254_cov_21.639024_g14094_i0 PRJNA674308 14329 254 21.639024 54.96312096 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 425 1.18e-114   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g14094 i0 96.85 9.14566929133858 254 8 100 0 1 254 1531 1784 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 2323 425 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
13398948 13398948 PRJNA674308_P_NODE_48871_length_164_cov_0.904348_g48636_i0 PRJNA674308 48871 164 0.904348 1.48313072 root 1 Root_unresolved Root_unresolved 85.5 8.06e-18   NR OMJ89959.1 5963 g48636 i0 67.9 14.2317073170732 53 17 97 0 163 5 128 180 OMJ89959.1 hypothetical protein SteCoe_7744 [Stentor coeruleus] diamond 2334 86.3 0.990730011587486 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Stentoridae Stentor Stentor coeruleus
13920650 13920650 PRJNA674308_P_NODE_46811_length_164_cov_29.052174_g46576_i0 PRJNA674308 46811 164 29.052174 47.64556536 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 303 3.42e-78   NTclustered gi|158147318|gb|EU047813.1| 151077 g46576 i0 100 71.1707317073171 164 0 100 0 1 164 254 91 Chilodonella uncinata strain ATCC 50194 5.8S ribosomal RNA gene and internal transcribed spacer 2, partial sequence; macronuclear blastn 11672 303 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
14673754 14673754 PRJNA674308_P_NODE_2972_length_564_cov_2.429126_g2742_i0 PRJNA674308 2972 564 2.429126 13.70027064 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 833 0   NTclustered gi|347439270|gb|JN111983.1| 151077 g2742 i0 93.451 31.6010638297872 565 32 99 5 1 562 340 902 Chilodonella uncinata strain USA_SC2 small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 17823 833 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
15947323 15947323 PRJNA674308_P_NODE_22193_length_210_cov_4.155280_g21958_i0 PRJNA674308 22193 210 4.15528 8.726088 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 366 5.7900000000000005e-97   NTclustered gi|1202135013|gb|KY476314.1| 151077 g21958 i0 98.095 99.6714285714286 210 4 100 0 1 210 297 88 Chilodonella uncinata 18S ribosomal RNA gene, partial sequence blastn 20931 366 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
16469600 16469600 PRJNA674308_P_NODE_7393_length_349_cov_23.080000_g7158_i0 PRJNA674308 7393 349 23.08 80.5492 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 198 4e-46   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g7158 i0 96.639 1.02292263610315 119 4 34 0 1 119 2964 3082 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 357 198 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
17222786 17222786 PRJNA674308_P_NODE_27174_length_192_cov_2.545455_g26939_i0 PRJNA674308 27174 192 2.545455 4.8872736 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 327 2.45e-85   NTclustered gi|1134929563|gb|KY508246.1| 151077 g26939 i0 97.861 15.9739583333333 187 4 97 0 4 190 208 22 Chilodonella uncinata isolate EL small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 3067 327 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
26903993 26903993 PRJNA674308_P_NODE_8361_length_329_cov_2.425000_g8126_i0 PRJNA674308 8361 329 2.425 7.97825 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 55.1 6.32e-7   NR XP_004039963.1 5932 g8126 i0 40.6 2.03343465045593 69 35 61.1 2 129 329 34 98 XP_004039963.1 regulator of chromosome condensation, putative [Ichthyophthirius multifiliis] diamond 669 55.1 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
27472944 27472944 PRJNA674308_P_NODE_29203_length_187_cov_0.913043_g28968_i0 PRJNA674308 29203 187 0.913043 1.70739041 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 42.7 0.0179   NR CAD8142037.1 43137 g28968 i0 36.8 2.58288770053476 57 35 91.4 1 174 4 5 60 CAD8142037.1 unnamed protein product [Paramecium octaurelia] diamond 483 42.7 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium octaurelia
27820367 27820367 PRJNA674308_P_NODE_38024_length_168_cov_0.873950_g37789_i0 PRJNA674308 38024 168 0.87395 1.468236 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 50.1 3.46e-5   NR KAL4440770.1 5901 g37789 i0 55.6 4.39285714285714 36 16 64.3 0 115 8 57 92 KAL4440770.1 hypothetical protein ABPG74_013751 [Tetrahymena malaccensis] diamond 738 50.1 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena malaccensis
28124094 28124094 PRJNA674308_P_NODE_16645_length_238_cov_1.164021_g16410_i0 PRJNA674308 16645 238 1.164021 2.77036998 Halteria grandinella 5974 SAR_Eukaryotes SAR_Eukaryotes 85.9 3.46e-18   NR TNV84871.1 5974 g16410 i0 66.7 2.30672268907563 57 19 71.8 0 65 235 120 176 TNV84871.1 hypothetical protein FGO68_gene11374 [Halteria grandinella] diamond 549 85.9 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Halteriidae Halteria Halteria grandinella
28136093 28136093 PRJNA674308_P_NODE_39805_length_167_cov_3.254237_g39570_i0 PRJNA674308 39805 167 3.254237 5.43457579 Ciliophora 5878 SAR_Eukaryotes SAR_Eukaryotes 55.1 5.75e-7   NR CDW75132.1 5949 g39570 i0 52.2 2.1377245508982 46 21 82.6 1 138 1 5 49 CDW75132.1 beta--glucan-binding [Stylonychia lemnae] diamond 357 55.1 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
28439933 28439933 PRJNA674308_P_NODE_7826_length_340_cov_1.642612_g7591_i0 PRJNA674308 7826 340 1.642612 5.5848808 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 77 1.8e-14   NR KRW99346.1 266149 g7591 i0 37.1 1.89705882352941 105 66 92.6 0 2 316 116 220 KRW99346.1 hypothetical protein PPERSA_02458 [Pseudocohnilembus persalinus] diamond 645 77 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
28471514 28471514 PRJNA674308_P_NODE_46966_length_164_cov_1.808696_g46731_i0 PRJNA674308 46966 164 1.808696 2.96626144 Stylonychia lemnae 5949 SAR_Eukaryotes SAR_Eukaryotes 51.6 9.4e-6   NR CDW91450.1 5949 g46731 i0 52.2 0.841463414634146 46 22 84.1 0 26 163 32 77 CDW91450.1 seryl-trna synthetase [Stylonychia lemnae] diamond 138 51.6 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
28566054 28566054 PRJNA674308_P_NODE_45007_length_165_cov_0.896552_g44772_i0 PRJNA674308 45007 165 0.896552 1.4793108 Stentor coeruleus 5963 SAR_Eukaryotes SAR_Eukaryotes 47.8 2.17e-4   NR OMJ82829.1 5963 g44772 i0 47.1 2.2 51 26 92.7 1 163 11 253 302 OMJ82829.1 hypothetical protein SteCoe_16362 [Stentor coeruleus] diamond 363 47.8 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Stentoridae Stentor Stentor coeruleus
28578046 28578046 PRJNA674308_P_NODE_32647_length_177_cov_1.625000_g32412_i0 PRJNA674308 32647 177 1.625 2.87625 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 58.5 4.17e-8   NR CDW74225.1 5949 g32412 i0 55.6 5.45762711864407 45 19 74.6 1 28 159 263 307 CDW74225.1 zinc zz type family [Stylonychia lemnae] diamond 966 58.5 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
28597792 28597792 PRJNA674308_P_NODE_32887_length_176_cov_2.866142_g32652_i0 PRJNA674308 32887 176 2.866142 5.04440992 Blepharisma stoltei 1481888 SAR_Eukaryotes SAR_Eukaryotes 46.2 8.89e-4   NR CAG9329449.1 1481888 g32652 i0 45.5 0.9375 55 24 93.8 1 11 175 105 153 CAG9329449.1 unnamed protein product [Blepharisma stoltei] diamond 165 46.2 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Blepharismidae Blepharisma Blepharisma stoltei
28862024 28862024 PRJNA674308_P_NODE_25168_length_199_cov_1.986667_g24933_i0 PRJNA674308 25168 199 1.986667 3.95346733 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 48.1 1.02e-4   NR OMJ79302.1 5963 g24933 i0 43.5 1.64321608040201 62 33 93.5 1 14 199 49 108 OMJ79302.1 hypothetical protein SteCoe_20725 [Stentor coeruleus] diamond 327 48.1 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Stentoridae Stentor Stentor coeruleus
29525343 29525343 PRJNA674308_P_NODE_1870_length_730_cov_4.779736_g957_i2 PRJNA674308 1870 730 4.779736 34.8920728 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 53.1 3.85e-4   NR CAI2371610.1 5936 g957 i2 27.7 1.1958904109589 155 95 60.8 5 61 504 1 145 CAI2371610.1 unnamed protein product [Moneuplotes crassus] diamond 873 53.1 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Moneuplotes Moneuplotes crassus
29765770 29765770 PRJNA674308_P_NODE_9411_length_310_cov_1.789272_g9176_i0 PRJNA674308 9411 310 1.789272 5.5467432 Ichthyophthirius multifiliis 5932 SAR_Eukaryotes SAR_Eukaryotes 58.9 1.72e-7   NR XP_004037524.1 5932 g9176 i0 37 1.61612903225806 81 44 78.4 2 29 271 254 327 XP_004037524.1 serine threonine kinase cdc2, putative [Ichthyophthirius multifiliis] diamond 501 58.9 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
29809282 29809282 PRJNA674308_P_NODE_32171_length_178_cov_2.000000_g31936_i0 PRJNA674308 32171 178 2 3.56 Oligohymenophorea 6020 SAR_Eukaryotes SAR_Eukaryotes 53.1 4.14e-7   NR XP_004039317.1 5932 g31936 i0 42.6 3.65730337078652 54 30 91 1 10 171 28 80 XP_004039317.1 hypothetical protein IMG5_027110 [Ichthyophthirius multifiliis] diamond 651 53.1 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
30398215 30398215 PRJNA674308_P_NODE_13973_length_258_cov_0.990431_g13738_i0 PRJNA674308 13973 258 0.990431 2.55531198 Stylonychia lemnae 5949 SAR_Eukaryotes SAR_Eukaryotes 125 4.7999999999999997e-32   NR CDW89125.1 5949 g13738 i0 61.9 1.95348837209302 84 32 97.7 0 254 3 306 389 CDW89125.1 UNKNOWN [Stylonychia lemnae] diamond 504 125 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
30472957 30472957 PRJNA674308_P_NODE_11973_length_277_cov_1.254386_g11738_i0 PRJNA674308 11973 277 1.254386 3.47464922 Ciliophora 5878 SAR_Eukaryotes SAR_Eukaryotes 119 1.17e-29   NR XP_001032401.3 312017 g11738 i0 59.6 1.92779783393502 89 36 96.4 0 10 276 199 287 XP_001032401.3 50S ribosomal protein L3 [Tetrahymena thermophila SB210] diamond 534 119 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
30524104 30524104 PRJNA674308_P_NODE_34453_length_172_cov_1.691057_g34218_i0 PRJNA674308 34453 172 1.691057 2.90861804 Stylonychia lemnae 5949 SAR_Eukaryotes SAR_Eukaryotes 60.8 3.24e-9   NR CDW90760.1 5949 g34218 i0 52.7 1.90116279069767 55 24 95.9 1 166 2 112 164 CDW90760.1 50s ribosomal protein l21 [Stylonychia lemnae] diamond 327 60.8 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
31820091 31820091 PRJNA674308_P_NODE_6937_length_361_cov_1.253205_g6702_i0 PRJNA674308 6937 361 1.253205 4.52407005 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 49.3 7.13e-4   NR KRX04628.1 266149 g6702 i0 40.4 0.43213296398892 52 31 43.2 0 260 105 763 814 KRX04628.1 P-loop containing nucleoside triphosphate hydrolase [Pseudocohnilembus persalinus] diamond 156 49.3 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
32799694 32799694 PRJNA674308_P_NODE_14340_length_254_cov_3.907317_g14105_i0 PRJNA674308 14340 254 3.907317 9.92458518 Ichthyophthirius multifiliis 5932 SAR_Eukaryotes SAR_Eukaryotes 73.2 2.87e-13   NR XP_004037460.1 5932 g14105 i0 52.6 0.673228346456693 57 27 67.3 0 84 254 50 106 XP_004037460.1 hypothetical protein IMG5_051520, partial [Ichthyophthirius multifiliis] diamond 171 73.2 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
32831409 32831409 PRJNA674308_P_NODE_2780_length_584_cov_2.035514_g2553_i0 PRJNA674308 2780 584 2.035514 11.88740176 Tetrahymena thermophila SB21 5911 SAR_Eukaryotes SAR_Eukaryotes 62.4 1.69e-7   NR XP_001023593.1 312017 g2553 i0 26.9 0.991438356164384 193 129 96.1 4 564 4 935 1121 XP_001023593.1 ABC transporter family protein [Tetrahymena thermophila SB210] diamond 579 62.4 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
32874709 32874709 PRJNA674308_P_NODE_4900_length_430_cov_2.152231_g4665_i0 PRJNA674308 4900 430 2.152231 9.2545933 Ciliophora 5878 SAR_Eukaryotes SAR_Eukaryotes 150 1.3399999999999996e-43   NR OMJ92653.1 5963 g4665 i0 65.3 3.44651162790698 101 31 70.5 1 303 1 19 115 OMJ92653.1 hypothetical protein SteCoe_4526 [Stentor coeruleus] diamond 1482 150 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Stentoridae Stentor Stentor coeruleus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;