RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA674308", tax_clade = "Nitrospinota/Tectimicrobiota group" and tax_phylum = "Nitrospinota"

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tax_superkingdom 1

tax_phylum 1

  • Nitrospinota · 2 ✖

tax_kingdom 1

tax_clade 1

  • Nitrospinota/Tectimicrobiota group · 2 ✖

bioproject 1

  • PRJNA674308 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28597787 28597787 PRJNA674308_P_NODE_28587_length_188_cov_2.165468_g28352_i0 PRJNA674308 28587 188 2.165468 4.07107984 Nitrospinota bacterium 2026769 Bacteria Bacteria 91.7 1e-19   NR MBF0290691.1 2026769 g28352 i0 72.1 3.82978723404255 61 17 97.3 0 184 2 475 535 MBF0290691.1 chaperonin GroEL [Nitrospinota bacterium] diamond 720 91.7 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota         Nitrospinota bacterium
29576205 29576205 PRJNA674308_P_NODE_17570_length_232_cov_1.677596_g17335_i0 PRJNA674308 17570 232 1.677596 3.89202272 Nitrospinota bacterium 2026769 Bacteria Bacteria 63.5 1.51e-9   NR MEC7641700.1 2026769 g17335 i0 58 2.26293103448276 50 21 64.7 0 151 2 381 430 MEC7641700.1 SEL1-like repeat protein [Nitrospinota bacterium] diamond 525 63.5 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota         Nitrospinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;