RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA674050", tax_phylum = "Pisuviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 4 ✖

tax_phylum 1

  • Pisuviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA674050 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10847522 10847522 PRJNA674050_P_NODE_16829_length_269_cov_1.392857_g16626_i0 PRJNA674050 16829 269 1.392857 3.74678533 Shenzhen dicistro-like virus 2789378 Viruses Viruses 409 1.27e-109   NTclustered gi|1940198121|gb|MT757492.1| 2789378 g16626 i0 94.052 3.00371747211896 269 16 100 0 1 269 3534 3802 Shenzhen dicistro-like virus strain CHNdp-2 polyprotein gene, complete cds blastn 808 409 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Shenzhen dicistro-like virus
24870211 24870211 PRJNA674050_P_NODE_32580_length_246_cov_0.895954_g32377_i0 PRJNA674050 32580 246 0.895954 2.20404684 Orthonoravirus melanogastri 3060507 Viruses Viruses 438 1.4599999999999996e-118   NTclustered gi|822478482|gb|KP970089.1| 3071212 g32377 i0 98.78 38.7276422764228 246 3 100 0 1 246 4039 4284 Nora virus isolate IM13 gp1 (gp1) gene, partial cds; replication polyprotein (gp2) and gp3 (gp3) genes, complete cds; and capsid protein (gp4) gene, partial cds blastn 9527 438 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Noraviridae Orthonoravirus Orthonoravirus melanogastri
24870557 24870557 PRJNA674050_P_NODE_42260_length_198_cov_10.832000_g42057_i0 PRJNA674050 42260 198 10.832 21.44736 Betacoronavirus pandemicum 3418604 Viruses Viruses 111 2.79e-20   NTclustered gi|2155033579|emb|OV039277.1| 2697049 g42057 i0 100 25.6464646464646 60 0 88 0 126 185 30567 30508 Severe acute respiratory syndrome coronavirus 2 isolate 165 genome assembly, chromosome: 165 blastn 5078 111 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
31504047 31504047 PRJNA674050_P_NODE_7936_length_316_cov_1.238683_g7733_i0 PRJNA674050 7936 316 1.238683 3.91423828 Xiangshan picorna-like virus 7 2886223 Viruses Viruses 87 1.6e-17   NR WNK16389.1 2886223 g7733 i0 42.3 0.987341772151899 104 60 98.7 0 315 4 211 314 WNK16389.1 MAG: RNA-dependent RNA polymerase, partial [Xiangshan picorna-like virus 7] diamond 312 87 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Xiangshan picorna-like virus 7

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;