RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA674050", tax_phylum = "Duplornaviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 3 ✖

tax_phylum 1

  • Duplornaviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA674050 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10848589 10848589 PRJNA674050_P_NODE_9589_length_303_cov_1.530435_g9386_i0 PRJNA674050 9589 303 1.530435 4.63721805 Shenzhen reo-like virus 1 2789623 Viruses Viruses 477 3.9299999999999986e-130   NTclustered gi|1940198125|gb|MT757494.1| 2789623 g9386 i0 95.05 1 303 15 100 0 1 303 723 421 Shenzhen reo-like virus 1 strain CHNdp-4 hypothetical protein gene, complete cds blastn 303 477 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales     Shenzhen reo-like virus 1
17222180 17222180 PRJNA674050_P_NODE_3494_length_387_cov_1.726115_g3291_i0 PRJNA674050 3494 387 1.726115 6.68006505 Shenzhen reo-like virus 1 2789623 Viruses Viruses 593 4.9e-165   NTclustered gi|1940198125|gb|MT757494.1| 2789623 g3291 i0 94.315 1 387 22 100 0 1 387 3582 3968 Shenzhen reo-like virus 1 strain CHNdp-4 hypothetical protein gene, complete cds blastn 387 593 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales     Shenzhen reo-like virus 1
22321659 22321659 PRJNA674050_P_NODE_41038_length_232_cov_2.572327_g40835_i0 PRJNA674050 41038 232 2.572327 5.96779864 Shenzhen reo-like virus 1 2789623 Viruses Viruses 335 1.8399999999999992e-87   NTclustered gi|1940198125|gb|MT757494.1| 2789623 g40835 i0 92.735 1.00862068965517 234 13 100 4 1 232 3477 3246 Shenzhen reo-like virus 1 strain CHNdp-4 hypothetical protein gene, complete cds blastn 234 335 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales     Shenzhen reo-like virus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;