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contig_metadata

17 rows where bioproject = "PRJNA674050" and tax_phylum = "Chlorophyta"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chlorophyta · 17 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA674050 · 17 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3194139 3194139 PRJNA674050_P_NODE_11763_length_289_cov_2.523148_g11560_i0 PRJNA674050 11763 289 2.523148 7.29189772 Tetrabaena socialis 47790 Plants Plants 420 6.359999999999998e-113   NTclustered gi|1042780592|gb|KX232643.1| 47790 g11560 i0 92.833 221.110726643599 293 15 99 5 2 289 23811 23520 Tetrabaena socialis chloroplast blastn 63901 420 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Tetrabaenaceae Tetrabaena Tetrabaena socialis
3718084 3718084 PRJNA674050_P_NODE_8343_length_312_cov_4.899582_g8140_i0 PRJNA674050 8343 312 4.899582 15.28669584 Chlamydomonadales 3042 Plants Plants 577 3.89e-160   NTclustered gi|430007894|gb|JX888471.1| 3055 g8140 i0 100 100 312 0 100 0 1 312 930 619 Chlamydomonas reinhardtii strain CC-620 18S ribosomal RNA gene, partial sequence blastn 31200 577 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
7023104 7023104 PRJNA674050_P_NODE_6346_length_332_cov_1.084942_g6143_i0 PRJNA674050 6346 332 1.084942 3.60200744 Prototheca bovis 2509265 Plants Plants 327 4.639999999999999e-85   NTclustered gi|1770690688|ref|NC_045058.1| 2509265 g6143 i0 85.397 83.1867469879518 315 46 95 0 18 332 29435 29121 Prototheca zopfii strain SAG 2021 mitochondrion, complete genome blastn 27618 327 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Prototheca Prototheca bovis
8819426 8819426 PRJNA674050_P_NODE_36747_length_243_cov_2.017647_g36544_i0 PRJNA674050 36747 243 2.017647 4.90288221 Eukaryota 2759 Plants Plants 449 6.65e-122   NTclustered gi|1714003650|gb|MN243923.1| 3079 g36544 i0 100 100.004115226337 243 0 100 0 1 243 25 267 Chlorella sp. isolate CAVR01 small subunit ribosomal RNA gene, partial sequence blastn 24301 449 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sp.
12645597 12645597 PRJNA674050_P_NODE_11590_length_290_cov_1.423963_g11387_i0 PRJNA674050 11590 290 1.423963 4.1294927 Chlamydomonadales 3042 Plants Plants 531 2.83e-146   NTclustered gi|17028282|gb|L43356.1|CRECPRRNLG 28464 g11387 i0 99.655 133.51724137931 290 1 100 0 1 290 3687 3976 Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene blastn 38720 531 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas zebra
15194948 15194948 PRJNA674050_P_NODE_9572_length_303_cov_2.000000_g9369_i0 PRJNA674050 9572 303 2 6.06 root 1 Root_unresolved Root_unresolved 560 3.79e-155   NTclustered gi|1212783794|gb|MF083691.1| 3055 g9369 i0 100 120.26402640264 303 0 100 0 1 303 36582 36884 Chlamydomonas reinhardtii strain CC-1051 M18 (ac9) mt+ chloroplast, complete genome blastn 36440 560 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
17222538 17222538 PRJNA674050_P_NODE_7134_length_323_cov_3.556000_g6931_i0 PRJNA674050 7134 323 3.556 11.48588 Chlamydomonas reinhardtii 3055 Plants Plants 597 3.11e-166   NTclustered gi|167047969|gb|EU410621.1| 3055 g6931 i0 100 61.5572755417957 323 0 100 0 1 323 3330 3008 Chlamydomonas reinhardtii 26S ribosomal RNA gene, partial sequence blastn 19883 597 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
18496422 18496422 PRJNA674050_P_NODE_33155_length_245_cov_1.744186_g32952_i0 PRJNA674050 33155 245 1.744186 4.2732557 Chlamydomonas reinhardtii 3055 Plants Plants 448 2.41e-121   NTclustered gi|1212783794|gb|MF083691.1| 3055 g32952 i0 99.592 147.897959183673 245 1 100 0 1 245 41115 40871 Chlamydomonas reinhardtii strain CC-1051 M18 (ac9) mt+ chloroplast, complete genome blastn 36235 448 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
19770238 19770238 PRJNA674050_P_NODE_1456_length_554_cov_2.216216_g1258_i0 PRJNA674050 1456 554 2.216216 12.27783664 Chlamydomonas reinhardtii 3055 Plants Plants 1024 0   NTclustered gi|1212783794|gb|MF083691.1| 3055 g1258 i0 100 149.404332129964 554 0 100 0 1 554 40598 40045 Chlamydomonas reinhardtii strain CC-1051 M18 (ac9) mt+ chloroplast, complete genome blastn 82770 1024 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
22843836 22843836 PRJNA674050_P_NODE_5318_length_346_cov_1.054945_g5115_i0 PRJNA674050 5318 346 1.054945 3.6501097 Marvania 97104 Plants Plants 211 5.11e-50   NTclustered gi|2724824493|gb|PP746561.1| 97105 g5115 i0 81.004 38.4508670520231 279 42 79 10 8 282 28725 28996 Marvania geminata culture SAG:12.88 mitochondrion, complete genome blastn 13304 211 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Marvania Marvania geminata
25392754 25392754 PRJNA674050_P_NODE_19960_length_258_cov_21.102703_g19757_i0 PRJNA674050 19960 258 21.102703 54.44497374 Eukaryota 2759 Plants Plants 292 1.27e-74   NTclustered gi|1255307117|gb|KY198301.1| 3067 g19757 i0 100 77.6589147286822 158 0 86 0 9 166 379 222 Volvox carteri isolate EMBOSS_001 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 20036 292 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
25392796 25392796 PRJNA674050_P_NODE_3720_length_380_cov_3.175896_g3517_i0 PRJNA674050 3720 380 3.175896 12.0684048 Chlamydomonas 3052 Plants Plants 702 0   NTclustered gi|2082265827|ref|XM_043070485.1| 3055 g3517 i0 100 100.189473684211 380 0 100 0 1 380 2278 1899 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_14g634365v5), mRNA blastn 38072 702 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
26669948 26669948 PRJNA674050_P_NODE_39461_length_242_cov_0.917160_g39258_i0 PRJNA674050 39461 242 0.91716 2.2195272 Trebouxia sp. C 2796353 Plants Plants 51.2 3.85e-5   NR KAL0043787.1 2905655 g39258 i0 39 0.954545454545455 77 42 89.3 1 225 10 482 558 KAL0043787.1 hypothetical protein WJX82_010718 [Trebouxia sp. C0006] diamond 231 51.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. C0006
28250200 28250200 PRJNA674050_P_NODE_28586_length_248_cov_0.891429_g28383_i0 PRJNA674050 28586 248 0.891429 2.21074392 Chlamydomonas incerta 51695 Plants Plants 120 2.15e-29   NR KAG2442811.1 51695 g28383 i0 67.1 3.82258064516129 79 26 95.6 0 12 248 340 418 KAG2442811.1 hypothetical protein HXX76_002890 [Chlamydomonas incerta] diamond 948 120 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas incerta
30081617 30081617 PRJNA674050_P_NODE_31252_length_247_cov_0.873563_g31049_i0 PRJNA674050 31252 247 0.873563 2.15770061 Haematococcus lacustris 44745 Plants Plants 90.1 8.52e-19   NR KAJ9513997.1 44745 g31049 i0 48.9 1.09311740890688 90 38 99.6 1 246 1 541 630 KAJ9513997.1 hypothetical protein QJQ45_021078 [Haematococcus lacustris] diamond 270 90.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
30346970 30346970 PRJNA674050_P_NODE_15892_length_272_cov_1.924623_g15689_i0 PRJNA674050 15892 272 1.924623 5.23497456 Chlorellales 35460 Plants Plants 84.3 1.17e-18   NR PRW20803.1 3076 g15689 i0 58.9 6.9375 90 26 99.3 2 270 1 27 105 PRW20803.1 60S ribosomal L35-like [Chlorella sorokiniana] diamond 1887 85.1 0.990599294947121 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
32516500 32516500 PRJNA674050_P_NODE_35399_length_244_cov_0.912281_g35196_i0 PRJNA674050 35399 244 0.912281 2.22596564 Tetradesmus obliquus 3088 Plants Plants 61.6 8.02e-9   NR WIA09331.1 3088 g35196 i0 55.6 3.90983606557377 45 20 55.3 0 233 99 500 544 WIA09331.1 hypothetical protein OEZ85_008738 [Tetradesmus obliquus] diamond 954 61.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;