RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA674050", tax_clade = "Opisthokonta" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA674050 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9572951 9572951 PRJNA674050_P_NODE_5628_length_341_cov_1.160448_g5425_i0 PRJNA674050 5628 341 1.160448 3.95712768 Lubomirskia baikalensis 289074 Porifera other_Eukaryota 131 1.2599999999999999e-34   NR CAI43320.1 289074 g5425 i0 67 4.18768328445748 88 29 77.4 0 264 1 107 194 CAI43320.1 cathepsin L [Lubomirskia baikalensis] diamond 1428 131 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Spongillida Lubomirskiidae Lubomirskia Lubomirskia baikalensis
28186966 28186966 PRJNA674050_P_NODE_37826_length_243_cov_0.911765_g37623_i0 PRJNA674050 37826 243 0.911765 2.21558895 Halichondria panicea 6063 Porifera other_Eukaryota 45.8 0.00221   NR XP_064393875.1 6063 g37623 i0 60 0.777777777777778 30 12 37 0 117 28 39 68 XP_064393875.1 emopamil-binding protein-like [Halichondria panicea] diamond 189 45.8 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Halichondriidae Halichondria Halichondria panicea

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;