RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA674050", tax_clade = "Opisthokonta" and tax_phylum = "Mucoromycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA674050 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19771344 19771344 PRJNA674050_P_NODE_7476_length_320_cov_1.259109_g7273_i0 PRJNA674050 7476 320 1.259109 4.0291488 Phycomyces blakesleeanus 4837 Fungi Fungi 111 4.88e-20   NTclustered gi|1069952983|ref|XM_018438479.1| 763407 g7273 i0 92.308 0.734375 78 6 24 0 238 315 1245 1168 Phycomyces blakesleeanus NRRL 1555(-) hypothetical protein mRNA blastn 235 111 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces blakesleeanus
28913132 28913132 PRJNA674050_P_NODE_24048_length_251_cov_0.876404_g23845_i0 PRJNA674050 24048 251 0.876404 2.19977404 Calcarisporiella thermophila 911321 Fungi Fungi 57.4 2.49e-7   NR XP_069252143.1 911321 g23845 i0 82.8 3.57370517928287 29 5 34.7 0 251 165 287 315 XP_069252143.1 40S ribosomal protein RACK1 [Calcarisporiella thermophila] diamond 897 57.4 1 Eukaryota Opisthokonta Fungi Mucoromycota   Calcarisporiellales Calcarisporiellaceae Calcarisporiella Calcarisporiella thermophila

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;