RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA674050", tax_clade = "Opisthokonta" and tax_phylum = "Cnidaria"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA674050 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6270251 6270251 PRJNA674050_P_NODE_26525_length_249_cov_9.835227_g26322_i0 PRJNA674050 26525 249 9.835227 24.48971523 Ellisella 328399 Cnidaria other_Eukaryota 97.1 1.03e-15   NTclustered gi|2689317297|gb|PP410744.1| 2751895 g26322 i0 95.161 22.7510040160643 62 2 25 1 163 224 3528 3588 Ellisella elongata voucher USNM:1660444 large subunit ribosomal RNA gene, partial sequence blastn 5665 97.1 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleralcyonacea Ellisellidae Ellisella Ellisella elongata
7022043 7022043 PRJNA674050_P_NODE_16466_length_270_cov_1.583756_g16263_i0 PRJNA674050 16466 270 1.583756 4.2761412 Anemonia sulcata 6108 Cnidaria other_Eukaryota 56.5 0.002   NTclustered gi|2917940696|emb|OZ237557.1| 6108 g16263 i0 96.97 0.122222222222222 33 1 12 0 200 232 2454386 2454418 Anemonia sulcata genome assembly, chromosome: 3 blastn 33 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
28881735 28881735 PRJNA674050_P_NODE_32908_length_246_cov_0.884393_g32705_i0 PRJNA674050 32908 246 0.884393 2.17560678 Stylophora pistillata 50429 Cnidaria other_Eukaryota 52.4 1.1e-5   NR PFX22391.1 50429 g32705 i0 52.7 7.02439024390244 55 24 64.6 2 241 83 173 227 PFX22391.1 hypothetical protein AWC38_SpisGene13092 [Stylophora pistillata] diamond 1728 52.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Stylophora Stylophora pistillata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;