RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA674050", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Altimarinota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Altimarinota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA674050 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28408248 28408248 PRJNA674050_P_NODE_3046_length_405_cov_1.277108_g2843_i0 PRJNA674050 3046 405 1.277108 5.1722874 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 121 4.1e-29   NR MFA6992485.1 2044595 g2843 i0 50.4 0.97037037037037 131 62 97 2 403 11 198 325 MFA6992485.1 LAGLIDADG family homing endonuclease [Candidatus Altimarinota bacterium] diamond 393 121 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
31820055 31820055 PRJNA674050_P_NODE_4797_length_354_cov_2.686833_g4594_i0 PRJNA674050 4797 354 2.686833 9.51138882 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 80.5 7.57e-15   NR MFA6992485.1 2044595 g4594 i0 43.1 0.983050847457627 116 62 96.6 4 343 2 2 115 MFA6992485.1 LAGLIDADG family homing endonuclease [Candidatus Altimarinota bacterium] diamond 348 80.5 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;