RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA674048" and tax_phylum = "Vulcanimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA674048 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1919188 1919188 PRJNA674048_P_NODE_13402_length_247_cov_4.161616_g13199_i0 PRJNA674048 13402 247 4.161616 10.27919152 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 259 1.23e-64   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g13199 i0 85.83 811.242914979757 247 31 99 4 1 245 5033261 5033505 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 200377 259 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
21045739 21045739 PRJNA674048_P_NODE_837_length_1247_cov_3.199499_g745_i0 PRJNA674048 837 1247 3.199499 39.89775253 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 1164 0   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g745 i0 83.807 879.402566158781 1266 163 99 37 1 1245 5033245 5032001 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 1096615 1164 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;