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contig_metadata

13 rows where bioproject = "PRJNA674048", tax_phylum = "Kitrinoviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 13 ✖

tax_phylum 1

  • Kitrinoviricota · 13 ✖

tax_kingdom 1

bioproject 1

  • PRJNA674048 · 13 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
643106 643106 PRJNA674048_P_NODE_33261_length_159_cov_3.709091_g33058_i0 PRJNA674048 33261 159 3.709091 5.89745469 Norway luteo-like virus 4 2034334 Viruses Viruses 272 9.28e-69   NTclustered gi|1240393781|gb|MF141070.1| 2034334 g33058 i0 97.484 1 159 4 100 0 1 159 5616 5774 Norway luteo-like virus 4 isolate NOR/B1V/Tofte/2014 RNA-dependent RNA-polymerase and coat protein genes, complete cds blastn 159 272 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Norway luteo-like virus 4
3717948 3717948 PRJNA674048_P_NODE_8343_length_334_cov_3.396491_g8140_i0 PRJNA674048 8343 334 3.396491 11.34427994 root 1 Root_unresolved Root_unresolved 606 5.359999999999998e-169   NTclustered gi|388240305|emb|HE818455.1| 12242 g8140 i0 99.401 100 334 2 100 0 1 334 2380 2047 Tobacco mosaic virus isolate Yihan-1, complete genome blastn 33400 606 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
5746586 5746586 PRJNA674048_P_NODE_25325_length_174_cov_2.104000_g25122_i0 PRJNA674048 25325 174 2.104 3.66096 Norway luteo-like virus 4 2034334 Viruses Viruses 316 4.7e-82   NTclustered gi|1240393781|gb|MF141070.1| 2034334 g25122 i0 100 0.982758620689655 171 0 98 0 4 174 3997 3827 Norway luteo-like virus 4 isolate NOR/B1V/Tofte/2014 RNA-dependent RNA-polymerase and coat protein genes, complete cds blastn 171 316 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Norway luteo-like virus 4
7021644 7021644 PRJNA674048_P_NODE_12126_length_263_cov_5.780374_g11923_i0 PRJNA674048 12126 263 5.780374 15.20238362 Tobamovirus tabaci 3432891 Viruses Viruses 481 2.58e-131   NTclustered gi|348605458|gb|JF920727.1| 12242 g11923 i0 99.62 99.6349809885932 263 1 100 0 1 263 6382 6120 Tobacco mosaic virus isolate Shanxi, complete genome blastn 26204 481 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
11369398 11369398 PRJNA674048_P_NODE_13069_length_251_cov_4.103960_g12866_i0 PRJNA674048 13069 251 4.10396 10.3009396 root 1 Root_unresolved Root_unresolved 459 1.1499999999999996e-124   NTclustered gi|388240305|emb|HE818455.1| 12242 g12866 i0 99.602 99.9521912350598 251 1 100 0 1 251 4561 4811 Tobacco mosaic virus isolate Yihan-1, complete genome blastn 25088 459 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
12122314 12122314 PRJNA674048_P_NODE_12570_length_257_cov_2.927885_g12367_i0 PRJNA674048 12570 257 2.927885 7.52466445 Tobamovirus tabaci 3432891 Viruses Viruses 459 1.18e-124   NTclustered gi|388240269|emb|HE818446.1| 12242 g12367 i0 98.833 100.007782101167 257 3 100 0 1 257 3584 3840 Tobacco mosaic virus isolate Wenxing, complete genome blastn 25702 459 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
18495440 18495440 PRJNA674048_P_NODE_19435_length_200_cov_2.390728_g19232_i0 PRJNA674048 19435 200 2.390728 4.781456 Tobamovirus tabaci 3432891 Viruses Viruses 363 7.069999999999999e-96   NTclustered gi|2770826564|gb|PQ032045.1| 12242 g19232 i0 99.497 99.505 199 1 99 0 1 199 4027 4225 Tobacco mosaic virus isolate Sru-1, complete genome blastn 19901 363 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
19770086 19770086 PRJNA674048_P_NODE_9876_length_300_cov_3.988048_g9673_i0 PRJNA674048 9876 300 3.988048 11.964144 Tobamovirus tabaci 3432891 Viruses Viruses 544 3.78e-150   NTclustered gi|2727871481|gb|OR360694.1| 12242 g9673 i0 99.333 100 300 2 100 0 1 300 406 107 Tobacco mosaic virus isolate TMV/ZT/120 coat protein (CP) gene, complete cds blastn 30000 544 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
22843673 22843673 PRJNA674048_P_NODE_6458_length_396_cov_2.452450_g6255_i0 PRJNA674048 6458 396 2.45245 9.711702 Tobamovirus 12234 Viruses Viruses 715 0   NTclustered gi|2327914667|gb|OM366242.1| 12242 g6255 i0 99.242 99.9343434343434 396 3 100 0 1 396 653 258 Tobacco mosaic virus isolate Yunnanwenshan replicase protein gene, complete cds blastn 39574 715 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
22843718 22843718 PRJNA674048_P_NODE_9718_length_303_cov_3.102362_g9515_i0 PRJNA674048 9718 303 3.102362 9.40015686 Tobamovirus 12234 Viruses Viruses 555 1.7599999999999995e-153   NTclustered gi|1823692201|gb|MN186255.1| 12242 g9515 i0 100 99.990099009901 300 0 99 0 4 303 5237 4938 Tobacco mosaic virus isolate Henan9-2-2017 CP, MP, 183K protein, and 130K protein genes, complete cds blastn 30297 555 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
23595896 23595896 PRJNA674048_P_NODE_17339_length_213_cov_2.219512_g17136_i0 PRJNA674048 17339 213 2.219512 4.72756056 Tobamovirus tabaci 3432891 Viruses Viruses 377 2.72e-100   NTclustered gi|388240233|emb|HE818437.1| 12242 g17136 i0 98.592 99.7370892018779 213 3 100 0 1 213 2049 1837 Tobacco mosaic virus isolate Mangshi-2, complete genome blastn 21244 377 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
23595916 23595916 PRJNA674048_P_NODE_1939_length_846_cov_2.392723_g1798_i0 PRJNA674048 1939 846 2.392723 20.24243658 Tobamovirus tabaci 3432891 Viruses Viruses 1502 0   NTclustered gi|388240305|emb|HE818455.1| 12242 g1798 i0 98.7 100.039007092199 846 11 100 0 1 846 4904 5749 Tobacco mosaic virus isolate Yihan-1, complete genome blastn 84633 1502 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
32421384 32421384 PRJNA674048_P_NODE_25459_length_174_cov_1.272000_g25256_i0 PRJNA674048 25459 174 1.272 2.21328 Tolivirales sp. 2809914 Viruses Viruses 49.3 6.99e-5   NR WRQ65701.1 2809914 g25256 i0 44.9 0.844827586206897 49 27 84.5 0 152 6 18 66 WRQ65701.1 structural protein [Tolivirales sp.] diamond 147 49.3 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Tolivirales sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;