RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA674048" and tax_phylum = "Kiritimatiellota"

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tax_superkingdom 1

tax_phylum 1

  • Kiritimatiellota · 1 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA674048 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26765270 26765270 PRJNA674048_P_NODE_30881_length_164_cov_0.904348_g30678_i0 PRJNA674048 30881 164 0.904348 1.48313072 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 39.7 0.0334   NR MBP5285696.1 2212473 g30678 i0 40.4 1.04268292682927 57 23 91.5 5 163 14 22 74 MBP5285696.1 alpha-L-rhamnosidase [Kiritimatiellia bacterium] diamond 171 39.7 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;