contig_metadata
12 rows where bioproject = "PRJNA674048", tax_phylum = "Bdellovibrionota" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2441320 | 2441320 | PRJNA674048_P_NODE_23382_length_182_cov_1.496241_g23179_i0 | PRJNA674048 | 23382 | 182 | 1.496241 | 2.72315862 | Micavibrio | 213485 | Bacteria | Bacteria | 209 | 8.68e-50 | NTclustered | gi|469926873|gb|CP003538.1| | 349215 | g23179 | i0 | 87.634 | 319.291208791209 | 186 | 16 | 100 | 6 | 1 | 182 | 463006 | 462824 | Micavibrio aeruginosavorus EPB, complete genome | blastn | 58111 | 209 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Micavibrio | Micavibrio aeruginosavorus | ||
| 3193978 | 3193978 | PRJNA674048_P_NODE_23083_length_183_cov_1.552239_g22880_i0 | PRJNA674048 | 23083 | 183 | 1.552239 | 2.84059737 | Bdellovibrio reynosensis | 2835041 | Bacteria | Bacteria | 150 | 5.37e-32 | NTclustered | gi|2216477995|gb|CP093442.1| | 2835041 | g22880 | i0 | 81.667 | 0.983606557377049 | 180 | 33 | 98 | 0 | 2 | 181 | 375524 | 375703 | Bdellovibrio reynosensis strain LBG001 chromosome, complete genome | blastn | 180 | 150 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio reynosensis | ||
| 7021746 | 7021746 | PRJNA674048_P_NODE_27006_length_169_cov_0.866667_g26803_i0 | PRJNA674048 | 27006 | 169 | 0.866667 | 1.46466723 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 87.9 | 3.87e-13 | NTclustered | gi|2893356065|emb|OZ220488.1| | 2053517 | g26803 | i0 | 94.737 | 1.06508875739645 | 57 | 2 | 34 | 1 | 113 | 169 | 730199 | 730144 | MAG: Bdellovibrionales bacterium isolate 0d1acec5-ee6a-42a0-9e8e-8bc2840f726d genome assembly, chromosome: 1 | blastn | 180 | 87.9 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 13920062 | 13920062 | PRJNA674048_P_NODE_32051_length_163_cov_0.912281_g31848_i0 | PRJNA674048 | 32051 | 163 | 0.912281 | 1.48701803 | Bdellovibrio | 958 | Bacteria | Bacteria | 196 | 5.93e-46 | NTclustered | gi|2898207634|gb|CP178861.1| | 3394234 | g31848 | i0 | 88.75 | 8.29447852760736 | 160 | 18 | 98 | 0 | 1 | 160 | 2699265 | 2699424 | Bdellovibrio sp. HCB-162 chromosome, complete genome | blastn | 1352 | 196 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. HCB-162 | ||
| 20292495 | 20292495 | PRJNA674048_P_NODE_26976_length_169_cov_0.866667_g26773_i0 | PRJNA674048 | 26976 | 169 | 0.866667 | 1.46466723 | Bdellovibrio | 958 | Bacteria | Bacteria | 169 | 1.34e-37 | NTclustered | gi|2801803968|gb|CP169237.1| | 959 | g26773 | i0 | 86.755 | 8.10650887573964 | 151 | 20 | 89 | 0 | 19 | 169 | 4059767 | 4059617 | Bdellovibrio bacteriovorus strain Bd3 chromosome, complete genome | blastn | 1370 | 169 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 21045651 | 21045651 | PRJNA674048_P_NODE_22997_length_183_cov_2.201493_g22794_i0 | PRJNA674048 | 22997 | 183 | 2.201493 | 4.02873219 | Bdellovibrio bacteriovorus | 959 | Bacteria | Bacteria | 307 | 3.0100000000000005e-79 | NTclustered | gi|2800920897|gb|CP168968.1| | 959 | g22794 | i0 | 97.753 | 282.497267759563 | 178 | 4 | 97 | 0 | 1 | 178 | 780737 | 780560 | Bdellovibrio bacteriovorus strain Bd5 chromosome, complete genome | blastn | 51697 | 307 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 24869229 | 24869229 | PRJNA674048_P_NODE_14200_length_239_cov_1.336842_g13997_i0 | PRJNA674048 | 14200 | 239 | 1.336842 | 3.19505238 | Bdellovibrio bacteriovorus | 959 | Bacteria | Bacteria | 401 | 1.8499999999999992e-107 | NTclustered | gi|2800920897|gb|CP168968.1| | 959 | g13997 | i0 | 98.673 | 236.790794979079 | 226 | 3 | 95 | 0 | 14 | 239 | 778697 | 778922 | Bdellovibrio bacteriovorus strain Bd5 chromosome, complete genome | blastn | 56593 | 401 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 26606725 | 26606725 | PRJNA674048_P_NODE_32001_length_163_cov_0.912281_g31798_i0 | PRJNA674048 | 32001 | 163 | 0.912281 | 1.48701803 | Bdellovibrio sp. | 28201 | Bacteria | Bacteria | 96.3 | 7.43e-22 | NR | WP_415063513.1 | 28201 | g31798 | i0 | 85.2 | 1.98773006134969 | 54 | 8 | 99.4 | 0 | 2 | 163 | 165 | 218 | WP_415063513.1 hypothetical protein [Bdellovibrio sp.] | diamond | 324 | 96.3 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. | ||
| 27587395 | 27587395 | PRJNA674048_P_NODE_30264_length_165_cov_0.896552_g30061_i0 | PRJNA674048 | 30264 | 165 | 0.896552 | 1.4793108 | Bdellovibrio sp. | 28201 | Bacteria | Bacteria | 47 | 4.01e-4 | NR | MFM6927017.1 | 28201 | g30061 | i0 | 41.5 | 0.963636363636364 | 53 | 31 | 96.4 | 0 | 164 | 6 | 190 | 242 | MFM6927017.1 hypothetical protein [Bdellovibrio sp.] | diamond | 159 | 47 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. | ||
| 28755512 | 28755512 | PRJNA674048_P_NODE_32747_length_162_cov_0.920354_g32544_i0 | PRJNA674048 | 32747 | 162 | 0.920354 | 1.49097348 | uncultured Bdellovibrio sp. | 239744 | Bacteria | Bacteria | 115 | 1.09e-28 | NR | WP_295905672.1 | 239744 | g32544 | i0 | 98.1 | 2 | 54 | 1 | 100 | 0 | 162 | 1 | 365 | 418 | WP_295905672.1 NAD(P)/FAD-dependent oxidoreductase [uncultured Bdellovibrio sp.] | diamond | 324 | 115 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | uncultured Bdellovibrio sp. | ||
| 28850058 | 28850058 | PRJNA674048_P_NODE_32868_length_162_cov_0.920354_g32665_i0 | PRJNA674048 | 32868 | 162 | 0.920354 | 1.49097348 | Bdellovibrio sp. HCB2-146 | 3394362 | Bacteria | Bacteria | 60.8 | 3.15e-9 | NR | WP_413940221.1 | 3394362 | g32665 | i0 | 87.9 | 1.24074074074074 | 33 | 4 | 61.1 | 0 | 61 | 159 | 4 | 36 | WP_413940221.1 SDR family oxidoreductase [Bdellovibrio sp. HCB2-146] | diamond | 201 | 60.8 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. HCB2-146 | ||
| 28881729 | 28881729 | PRJNA674048_P_NODE_25948_length_172_cov_1.691057_g25745_i0 | PRJNA674048 | 25948 | 172 | 1.691057 | 2.90861804 | Bdellovibrio sp. | 28201 | Bacteria | Bacteria | 55.1 | 6.08e-7 | NR | NUN07072.1 | 28201 | g25745 | i0 | 50 | 0.906976744186046 | 52 | 26 | 90.7 | 0 | 15 | 170 | 239 | 290 | NUN07072.1 hypothetical protein [Bdellovibrio sp.] | diamond | 156 | 55.1 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;