RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA674048", tax_kingdom = "Metazoa" and tax_phylum = "Rotifera"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Rotifera · 8 ✖

tax_kingdom 1

  • Metazoa · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA674048 · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3193924 3193924 PRJNA674048_P_NODE_13583_length_245_cov_3.142857_g13380_i0 PRJNA674048 13583 245 3.142857 7.69999965 Adineta vaga complex sp. B JFF-2016 1813165 Rotifera other_Eukaryota 442 1.1199999999999994e-119   NTclustered gi|1005055631|gb|KU860774.1| 1813165 g13380 i0 99.184 26.334693877551 245 2 100 0 1 245 1447 1691 Adineta vaga complex sp. B JFF-2016 isolate H158a 28S ribosomal RNA gene, partial sequence blastn 6452 442 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga complex sp. B JFF-2016
12645264 12645264 PRJNA674048_P_NODE_21530_length_189_cov_3.385714_g21327_i0 PRJNA674048 21530 189 3.385714 6.39899946 Eurotatoria 2816136 Rotifera other_Eukaryota 344 2.39e-90   NTclustered gi|1399047|gb|U41281.1|PAU41281 44582 g21327 i0 99.471 100.116402116402 189 1 100 0 1 189 170 358 Philodina acuticornis 18S rRNA gene blastn 18922 344 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina acuticornis
15945808 15945808 PRJNA674048_P_NODE_26753_length_169_cov_1.733333_g26550_i0 PRJNA674048 26753 169 1.733333 2.92933277 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 85.5 3.5e-18   NR CAF0892122.1 104777 g26550 i0 78.2 1.95266272189349 55 12 97.6 0 165 1 11 65 CAF0892122.1 unnamed protein product [Brachionus calyciflorus] diamond 330 85.5 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
17221137 17221137 PRJNA674048_P_NODE_24534_length_177_cov_2.312500_g24331_i0 PRJNA674048 24534 177 2.3125 4.093125 Adineta vaga 104782 Rotifera other_Eukaryota 300 4.84e-77   NTclustered gi|259129963|gb|GQ398061.1| 104782 g24331 i0 97.175 3.12994350282486 177 5 100 0 1 177 10205 10381 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 554 300 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
27113198 27113198 PRJNA674048_P_NODE_32922_length_162_cov_0.920354_g32719_i0 PRJNA674048 32922 162 0.920354 1.49097348 Rotaria sp. Silwood1 2762511 Rotifera other_Eukaryota 49.3 6.28e-5   NR CAF4860072.1 2762511 g32719 i0 61.5 5.05555555555556 39 13 68.5 1 4 114 2391 2429 CAF4860072.1 unnamed protein product, partial [Rotaria sp. Silwood1] diamond 819 49.3 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sp. Silwood1
27176386 27176386 PRJNA674048_P_NODE_30922_length_164_cov_0.904348_g30719_i0 PRJNA674048 30922 164 0.904348 1.48313072 Didymodactylos carnosus 1234261 Rotifera other_Eukaryota 88.6 8.67e-19   NR CAF1096185.1 1234261 g30719 i0 70.4 0.98780487804878 54 16 98.8 0 163 2 341 394 CAF1096185.1 unnamed protein product [Didymodactylos carnosus] diamond 162 88.6 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Didymodactylos Didymodactylos carnosus
32358325 32358325 PRJNA674048_P_NODE_27299_length_169_cov_0.866667_g27096_i0 PRJNA674048 27299 169 0.866667 1.46466723 Rotaria sp. Silwood2 2762512 Rotifera other_Eukaryota 52 1.15e-6   NR CAF3440507.1 2762512 g27096 i0 88.5 0.461538461538462 26 3 46.2 0 167 90 44 69 CAF3440507.1 unnamed protein product [Rotaria sp. Silwood2] diamond 78 52 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sp. Silwood2
32465057 32465057 PRJNA674048_P_NODE_17799_length_210_cov_1.795031_g17596_i0 PRJNA674048 17799 210 1.795031 3.7695651 Metazoa 33208 Rotifera other_Eukaryota 44.7 0.00534   NR KAI3384069.1 104778 g17596 i0 40.6 15.4428571428571 64 34 91.4 2 207 16 1325 1384 KAI3384069.1 hypothetical protein SNEBB_000281 [Seison nebaliae] diamond 3243 44.7 1 Eukaryota Opisthokonta Metazoa Rotifera Pararotatoria Seisonacea Seisonidae Seison Seison nebaliae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;