RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA674048", tax_kingdom = "Metazoa" and tax_phylum = "Platyhelminthes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 7 ✖

tax_kingdom 1

  • Metazoa · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA674048 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8296385 8296385 PRJNA674048_P_NODE_21267_length_190_cov_6.588652_g21064_i0 PRJNA674048 21267 190 6.588652 12.5184388 Stenostomum leucops 52061 Platyhelminthes Platyhelminthes 340 3.1099999999999993e-89   NTclustered gi|28273263|gb|AY157151.1| 52061 g21064 i0 98.947 42.6631578947368 190 2 100 0 1 190 1844 2033 Stenostomum leucops 28S large subunit ribosomal RNA gene, partial sequence blastn 8106 340 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum leucops
17221250 17221250 PRJNA674048_P_NODE_5314_length_452_cov_5.615385_g5111_i0 PRJNA674048 5314 452 5.615385 25.3815402 Stenostomum sp. 'island' 570256 Platyhelminthes Platyhelminthes 747 0   NTclustered gi|209968693|gb|FJ384856.1| 570256 g5111 i0 96.468 58.3716814159292 453 15 100 1 1 452 790 338 Stenostomum sp. 'island' isolate K04_93 28S ribosomal RNA gene, partial sequence blastn 26384 747 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum sp. 'island'
18495563 18495563 PRJNA674048_P_NODE_9435_length_309_cov_1.196154_g9232_i0 PRJNA674048 9435 309 1.196154 3.69611586 Stenostomum cf. simplex AW-2018 2495572 Platyhelminthes Platyhelminthes 545 1.0899999999999999e-150   NTclustered gi|1532673575|gb|MH663467.1| 2495572 g9232 i0 98.697 0.993527508090615 307 4 99 0 1 307 86 392 Stenostomum cf. simplex AW-2018 16S ribosomal RNA gene, partial sequence; mitochondrial blastn 307 545 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum cf. simplex AW-2018
19769933 19769933 PRJNA674048_P_NODE_18616_length_205_cov_1.897436_g18413_i0 PRJNA674048 18616 205 1.897436 3.8897438 Bresslauilla relicta 1311963 Platyhelminthes Platyhelminthes 86.1 1.77e-12   NTclustered gi|588313927|gb|KC869885.1| 1311963 g18413 i0 81.081 0.819512195121951 111 17 54 2 16 126 1606 1712 Bresslauilla relicta 28S ribosomal RNA genes, partial sequence blastn 168 86.1 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Rhabdocoela Graffillidae Bresslauilla Bresslauilla relicta
22320443 22320443 PRJNA674048_P_NODE_26978_length_169_cov_0.866667_g26775_i0 PRJNA674048 26978 169 0.866667 1.46466723 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 90.5 5.37e-20   NR VDM26248.1 6205 g26775 i0 79.6 76.0828402366864 54 11 95.9 0 1 162 73 126 VDM26248.1 unnamed protein product, partial [Hydatigera taeniaeformis] diamond 12858 90.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Hydatigera Hydatigera taeniaeformis
23595905 23595905 PRJNA674048_P_NODE_18079_length_208_cov_2.320755_g17876_i0 PRJNA674048 18079 208 2.320755 4.8271704 Stenostomum cf. simplex AW-2018 2495572 Platyhelminthes Platyhelminthes 374 3.4199999999999996e-99   NTclustered gi|1532673575|gb|MH663467.1| 2495572 g17876 i0 99.038 2 208 2 100 0 1 208 566 773 Stenostomum cf. simplex AW-2018 16S ribosomal RNA gene, partial sequence; mitochondrial blastn 416 374 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum cf. simplex AW-2018
30504491 30504491 PRJNA674048_P_NODE_25093_length_175_cov_1.650794_g24890_i0 PRJNA674048 25093 175 1.650794 2.8888895 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 61.6 3.12e-9   NR CAH8620869.1 57078 g24890 i0 52.1 3.37714285714286 48 20 82.3 1 15 158 333 377 CAH8620869.1 unnamed protein product [Dicrocoelium dendriticum] diamond 591 62 0.993548387096774 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;