RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA674048", tax_kingdom = "Metazoa" and tax_phylum = "Hemichordata"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Hemichordata · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA674048 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27757328 27757328 PRJNA674048_P_NODE_22284_length_186_cov_2.153285_g22081_i0 PRJNA674048 22284 186 2.153285 4.0051101 Opisthokonta 33154 Hemichordata other_Eukaryota 52 9.7e-6   NR XP_006822355.1 10224 g22081 i0 51 7.08064516129032 49 24 79 0 159 13 158 206 XP_006822355.1 PREDICTED: NADPH--cytochrome P450 reductase-like [Saccoglossus kowalevskii] diamond 1317 52.4 0.99236641221374 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Harrimaniidae Saccoglossus Saccoglossus kowalevskii
28186962 28186962 PRJNA674048_P_NODE_6786_length_384_cov_1.847761_g6583_i0 PRJNA674048 6786 384 1.847761 7.09540224 Saccoglossus kowalevskii 10224 Hemichordata other_Eukaryota 117 4.7000000000000005e-28   NR XP_006815879.1 10224 g6583 i0 49 2.2265625 104 52 80.5 1 76 384 9 112 XP_006815879.1 PREDICTED: ornithine decarboxylase-like [Saccoglossus kowalevskii] diamond 855 117 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Harrimaniidae Saccoglossus Saccoglossus kowalevskii

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;