RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA674048", tax_clade = "Sar" and tax_phylum = "Foraminifera"

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tax_superkingdom 1

tax_phylum 1

  • Foraminifera · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA674048 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29797313 29797313 PRJNA674048_P_NODE_28031_length_168_cov_0.873950_g27828_i0 PRJNA674048 28031 168 0.87395 1.468236 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 45.1 0.00168   NR ETO06730.1 46433 g27828 i0 40.8 0.875 49 25 80.4 1 3 137 115 163 ETO06730.1 hypothetical protein RFI_30663, partial [Reticulomyxa filosa] diamond 147 45.1 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
30239761 30239761 PRJNA674048_P_NODE_32152_length_163_cov_0.859649_g31949_i0 PRJNA674048 32152 163 0.859649 1.40122787 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 59.7 1.18e-8   NR ETO26978.1 46433 g31949 i0 52.1 0.883435582822086 48 23 88.3 0 146 3 243 290 ETO26978.1 hypothetical protein RFI_10156, partial [Reticulomyxa filosa] diamond 144 59.7 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;