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contig_metadata

8 rows where bioproject = "PRJNA674048", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA674048 · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3194067 3194067 PRJNA674048_P_NODE_34163_length_152_cov_2.019417_g33960_i0 PRJNA674048 34163 152 2.019417 3.06951384 Selenidium pyroidea 2605653 SAR_Eukaryotes SAR_Eukaryotes 71.3 3.43e-8   NTclustered gi|1730679298|gb|MN381957.1| 2605653 g33960 i0 100 26.9210526315789 38 0 25 0 115 152 4669 4706 Selenidium pyroidea isolate AK3 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 4092 71.3 1 Eukaryota Sar   Apicomplexa Conoidasida Archigregarinorida Selenidiidae Selenidium Selenidium pyroidea
6269869 6269869 PRJNA674048_P_NODE_20165_length_196_cov_2.122449_g19962_i0 PRJNA674048 20165 196 2.122449 4.16000004 Eimeria 5800 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.005   NTclustered gi|915016625|ref|XM_013397533.1| 5801 g19962 i0 94.286 1.52551020408163 35 2 18 0 23 57 270 236 Eimeria acervulina hypothetical protein, conserved partial mRNA blastn 299 54.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria acervulina
8296391 8296391 PRJNA674048_P_NODE_22067_length_187_cov_2.166667_g21864_i0 PRJNA674048 22067 187 2.166667 4.05166729 Plasmodium vinckei 5860 SAR_Eukaryotes SAR_Eukaryotes 60.2 9.57e-5   NTclustered gi|1931714359|ref|XR_552297.2| 54757 g21864 i0 86.792 6.24598930481283 53 7 28 0 99 151 4102 4050 Plasmodium vinckei vinckei ribosomal RNA (PVVCY_0502190), rRNA blastn 1168 60.2 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium vinckei
14672078 14672078 PRJNA674048_P_NODE_15812_length_224_cov_2.537143_g15609_i0 PRJNA674048 15812 224 2.537143 5.68320032 Cryptosporidium ubiquitum 857276 SAR_Eukaryotes SAR_Eukaryotes 183 6.76e-42   NTclustered gi|1624737946|ref|XM_029018495.1| 857276 g15609 i0 83.673 30.03125 196 30 87 2 26 220 1 195 Cryptosporidium ubiquitum histone H3 (cubi_01483), partial mRNA blastn 6727 183 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium ubiquitum
18495498 18495498 PRJNA674048_P_NODE_28095_length_168_cov_0.873950_g27892_i0 PRJNA674048 28095 168 0.87395 1.468236 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 119 1.37e-22   NTclustered gi|820688590|tpe|LN714475.1| 572307 g27892 i0 89.583 18.3214285714286 96 6 56 3 3 96 42485 42578 TPA_asm: Neospora caninum Liverpool, chromosome chrIb, complete genome blastn 3078 119 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
24118047 24118047 PRJNA674048_P_NODE_34139_length_152_cov_2.417476_g33936_i0 PRJNA674048 34139 152 2.417476 3.67456352 Apicomplexa 5794 SAR_Eukaryotes SAR_Eukaryotes 58.4 2.67e-4   NTclustered gi|527046684|tpe|HG323586.1| 5833 g33936 i0 100 2.74342105263158 31 0 20 0 100 130 159 189 TPA: Plasmodium falciparum SRP RNA for signal recognition particle RNA blastn 417 58.4 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium falciparum
27694213 27694213 PRJNA674048_P_NODE_28744_length_167_cov_0.881356_g28541_i0 PRJNA674048 28744 167 0.881356 1.47186452 Toxoplasma 5810 SAR_Eukaryotes SAR_Eukaryotes 57.8 6.65e-8   NR XP_018635896.1 508771 g28541 i0 49.2 6.21556886227545 59 25 98.8 2 167 3 1014 1071 XP_018635896.1 sushi domain (scr repeat) domain-containing protein [Toxoplasma gondii ME49] diamond 1038 57.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
29765716 29765716 PRJNA674048_P_NODE_24111_length_179_cov_1.600000_g23908_i0 PRJNA674048 24111 179 1.6 2.864 Cryptosporidium andersoni 117008 SAR_Eukaryotes SAR_Eukaryotes 89.7 1.76e-20   NR XP_067069864.1 117008 g23908 i0 71.2 1.9608938547486 59 17 98.9 0 1 177 14 72 XP_067069864.1 60s ribosomal protein L13A [Cryptosporidium andersoni] diamond 351 89.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium andersoni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;