RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA674048", tax_clade = "FCB group" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA674048 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17221144 17221144 PRJNA674048_P_NODE_25374_length_174_cov_1.664000_g25171_i0 PRJNA674048 25374 174 1.664 2.89536 Ignavibacteriales bacterium 2049428 Bacteria Bacteria 113 3.56e-30   NR MBK7866671.1 2049428 g25171 i0 100 0.982758620689655 57 0 98.3 0 3 173 26 82 MBK7866671.1 50S ribosomal protein L10 [Ignavibacteriales bacterium] diamond 171 113 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     Ignavibacteriales bacterium
28029425 28029425 PRJNA674048_P_NODE_28305_length_167_cov_1.762712_g28102_i0 PRJNA674048 28305 167 1.762712 2.94372904 Ignavibacteria bacterium 2053306 Bacteria Bacteria 105 1.05e-24   NR MBK7988194.1 2053306 g28102 i0 88.9 0.970059880239521 54 6 97 0 3 164 345 398 MBK7988194.1 vitamin B12-dependent ribonucleotide reductase [Ignavibacteria bacterium] diamond 162 105 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
30188359 30188359 PRJNA674048_P_NODE_24872_length_176_cov_1.637795_g24669_i0 PRJNA674048 24872 176 1.637795 2.8825192 Pseudomonadati 3379134 Bacteria Bacteria 73.9 4.7e-14   NR MBK7987695.1 2053306 g24669 i0 66.7 1.73863636363636 51 17 86.9 0 160 8 4 54 MBK7987695.1 hypothetical protein [Ignavibacteria bacterium] diamond 306 73.9 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;