RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA674048", tax_clade = "Apusozoa" and tax_superkingdom = "Eukaryota"

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analysis 2

tax_superkingdom 1

  • Eukaryota · 7 ✖

tax_clade 1

  • Apusozoa · 7 ✖

bioproject 1

  • PRJNA674048 · 7 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1919329 1919329 PRJNA674048_P_NODE_31882_length_163_cov_0.912281_g31679_i0 PRJNA674048 31882 163 0.912281 1.48701803 Thecamonas trahens 529818 Root_unresolved Root_unresolved 169 1.29e-37   NTclustered gi|923125359|ref|XM_013900694.1| 461836 g31679 i0 85.366 84.0613496932515 164 22 100 2 1 163 254 92 Thecamonas trahens ATCC 50062 calmodulin (AMSG_07687), mRNA blastn 13702 169 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
9571561 9571561 PRJNA674048_P_NODE_16268_length_221_cov_1.197674_g16065_i0 PRJNA674048 16268 221 1.197674 2.64685954 Thecamonas trahens 529818 Root_unresolved Root_unresolved 141 4.06e-29   NTclustered gi|923137764|ref|XM_013906893.1| 461836 g16065 i0 82.143 0.760180995475113 168 26 75 4 56 221 7 172 Thecamonas trahens ATCC 50062 40S ribosomal protein SA (AMSG_00611), partial mRNA blastn 168 141 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27334789 27334789 PRJNA674048_P_NODE_29463_length_166_cov_0.888889_g29260_i0 PRJNA674048 29463 166 0.888889 1.47555574 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 48.9 8.94e-5   NR XP_013760817.1 461836 g29260 i0 44.4 0.975903614457831 54 30 97.6 0 5 166 413 466 XP_013760817.1 alpha-actinin A [Thecamonas trahens ATCC 50062] diamond 162 48.9 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
28850059 28850059 PRJNA674048_P_NODE_5628_length_435_cov_1.611399_g5425_i0 PRJNA674048 5628 435 1.611399 7.00958565 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 121 5.23e-31   NR XP_013762487.1 461836 g5425 i0 48 3.44137931034483 125 64 85.5 1 435 64 107 231 XP_013762487.1 countin-1 [Thecamonas trahens ATCC 50062] diamond 1497 121 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
30524073 30524073 PRJNA674048_P_NODE_18993_length_203_cov_1.331169_g18790_i0 PRJNA674048 18993 203 1.331169 2.70227307 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 62.4 2.56e-9   NR XP_013760279.1 461836 g18790 i0 41.8 0.990147783251232 67 31 99 1 202 2 322 380 XP_013760279.1 uncharacterized protein AMSG_02933 [Thecamonas trahens ATCC 50062] diamond 201 62.4 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
30681836 30681836 PRJNA674048_P_NODE_23613_length_181_cov_1.530303_g23410_i0 PRJNA674048 23613 181 1.530303 2.76984843 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 52 9.83e-7   NR XP_013760674.1 461836 g23410 i0 41.7 0.795580110497238 48 28 79.6 0 35 178 19 66 XP_013760674.1 uncharacterized protein AMSG_02833 [Thecamonas trahens ATCC 50062] diamond 144 52 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32168426 32168426 PRJNA674048_P_NODE_26898_length_169_cov_1.291667_g26695_i0 PRJNA674048 26898 169 1.291667 2.18291723 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 44.7 0.00294   NR XP_013760404.1 461836 g26695 i0 48.9 0.834319526627219 47 23 83.4 1 168 28 512 557 XP_013760404.1 uncharacterized protein AMSG_03068 [Thecamonas trahens ATCC 50062] diamond 141 44.7 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;