RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA672101" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA672101 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28546670 28546670 PRJNA672101_S_NODE_8747_length_359_cov_5.835664_g8716_i0 PRJNA672101 8747 359 5.835664 20.95003376 Metazoa 33208 Platyhelminthes Platyhelminthes 132 2e-35   NR CDS25068.1 6210 g8716 i0 53.4 15.7771587743733 118 55 98.6 0 359 6 71 188 CDS25068.1 Heat shock 70 kDa protein [Echinococcus granulosus] diamond 5664 133 0.992481203007519 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Echinococcus Echinococcus granulosus
28735890 28735890 PRJNA672101_S_NODE_28707_length_251_cov_0.865169_g28676_i0 PRJNA672101 28707 251 0.865169 2.17157419 Metazoa 33208 Platyhelminthes Platyhelminthes 46.6 0.00166   NR VDL61833.1 6216 g28676 i0 42.3 2.78486055776892 78 41 88.4 2 250 29 203 280 VDL61833.1 unnamed protein product [Hymenolepis diminuta] diamond 699 47 0.991489361702128 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Hymenolepididae Hymenolepis Hymenolepis diminuta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;