RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA672101", tax_phylum = "Pisuviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 8 ✖

tax_phylum 1

  • Pisuviricota · 8 ✖

tax_kingdom 1

bioproject 1

  • PRJNA672101 · 8 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2440808 2440808 PRJNA672101_S_NODE_19982_length_285_cov_5.424528_g19951_i0 PRJNA672101 19982 285 5.424528 15.4599048 Cripavirus 144051 Viruses Viruses 481 2.83e-131   NTclustered gi|1758971469|gb|MK704471.1| 209529 g19951 i0 97.193 63.1333333333333 285 7 100 1 1 285 9516 9799 Aphid lethal paralysis virus isolate ALPV-CE, complete genome blastn 17993 481 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae Cripavirus Cripavirus mortiferum
10845785 10845785 PRJNA672101_S_NODE_1069_length_586_cov_33.633528_g1041_i0 PRJNA672101 1069 586 33.633528 197.09247408 Dolerus tritici iflavirus 1 3350209 Viruses Viruses 56.5 0.004   NTclustered gi|2833733277|gb|PQ323359.2| 3350209 g1041 i0 96.97 0.10580204778157 33 1 6 0 1 33 56 88 Dolerus tritici iflavirus 1 isolate HN-WS polyprotein gene, complete cds blastn 62 56.5 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Dolerus tritici iflavirus 1
19768821 19768821 PRJNA672101_S_NODE_28376_length_251_cov_1.983146_g28345_i0 PRJNA672101 28376 251 1.983146 4.97769646 Porcine bastrovirus 2588662 Viruses Viruses 56.5 0.002   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g28345 i0 96.97 0.247011952191235 33 1 13 0 1 33 13 45 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 62 56.5 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
26796934 26796934 PRJNA672101_S_NODE_13381_length_322_cov_5.361446_g13350_i0 PRJNA672101 13381 322 5.361446 17.26385612 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 52 5.46e-5   NR QDH87818.1 3003959 g13350 i0 39.2 1.35093167701863 74 43 67.1 2 89 304 562 635 QDH87818.1 MAG: RNA-dependent RNA polymerase, partial [Picornavirales sp.] diamond 435 52 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
27251693 27251693 PRJNA672101_S_NODE_13683_length_320_cov_6.619433_g13652_i0 PRJNA672101 13683 320 6.619433 21.1821856 Iflavirus 232799 Viruses Viruses 47 0.00312   NR DBA62680.1 1916690 g13652 i0 27.5 3.515625 109 60 84.4 2 1 270 651 759 DBA62680.1 TPA_asm: polyprotein [Iflavirus sp.] diamond 1125 47 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Iflavirus sp.
28186938 28186938 PRJNA672101_S_NODE_5966_length_392_cov_1.805643_g5935_i0 PRJNA672101 5966 392 1.805643 7.07812056 Crocidura lasiura aparavirus 3139585 Viruses Viruses 134 2.449999999999999e-38   NR WZI33169.1 3139585 g5935 i0 80.3 0.581632653061224 76 15 58.2 0 161 388 1 76 WZI33169.1 MAG: hypothetical protein, partial [Crocidura lasiura aparavirus] diamond 228 134 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae Aparavirus Crocidura lasiura aparavirus
29840979 29840979 PRJNA672101_S_NODE_6831_length_380_cov_6.019544_g6800_i0 PRJNA672101 6831 380 6.019544 22.8742672 Sadwavirus 215920 Viruses Viruses 101 4.35e-22   NR ASU55991.1 2170181 g6800 i0 46 3.56842105263158 113 59 89.2 1 349 11 1520 1630 ASU55991.1 polyprotein [Dioscorea mosaic associated virus] diamond 1356 101 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae Sadwavirus Sadwavirus dioscoreae
30883535 30883535 PRJNA672101_S_NODE_14_length_2056_cov_10.640444_g11_i0 PRJNA672101 14 2056 10.640444 218.76752864 Picornavirales 464095 Viruses Viruses 101 6.92e-18   NR UBX89813.1 680112 g11 i0 28.4 2.28939688715953 296 190 41 7 131 973 1434 1722 UBX89813.1 polyprotein [Carrot necrotic dieback virus] diamond 4707 101 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae Sequivirus Sequivirus carotae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;